Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS15075

Experiment: Ying_Nucleobase14 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 1
3,275,595	+		ABIE51_RS15065	0.81	+0.0
3,275,689	-		ABIE51_RS15065	0.84	+0.1
3,275,689	-		ABIE51_RS15065	0.84	-0.9
3,275,809	-		ABIE51_RS15065	0.87	+0.7
3,275,841	-		ABIE51_RS15065	0.88	+0.3
3,275,841	-		ABIE51_RS15065	0.88	-1.7
3,275,841	-		ABIE51_RS15065	0.88	-0.3
3,275,844	+		ABIE51_RS15065	0.88	-0.4
3,275,844	+		ABIE51_RS15065	0.88	-0.4
3,275,844	+		ABIE51_RS15065	0.88	+1.1
3,275,845	-		ABIE51_RS15065	0.88	+0.2
3,275,845	-		ABIE51_RS15065	0.88	+1.0
3,275,946	+				-0.3
3,275,946	+				+0.3
3,275,946	+				-0.4
3,275,955	+				-0.2
3,276,353	+		ABIE51_RS15070	0.29	-0.6
3,276,353	+		ABIE51_RS15070	0.29	-0.6
3,276,353	+		ABIE51_RS15070	0.29	+0.2
3,276,354	-		ABIE51_RS15070	0.29	-0.1
3,276,354	-		ABIE51_RS15070	0.29	-0.0
3,276,354	-		ABIE51_RS15070	0.29	-0.9
3,276,354	-		ABIE51_RS15070	0.29	-1.1
3,276,507	+				-0.3
3,276,508	-				+0.3
3,277,327	+		ABIE51_RS15075	0.57	-0.5
3,277,327	+		ABIE51_RS15075	0.57	+0.1
3,277,327	+		ABIE51_RS15075	0.57	-0.3
3,277,327	+		ABIE51_RS15075	0.57	-0.0
3,277,327	+		ABIE51_RS15075	0.57	-1.1
3,277,328	-		ABIE51_RS15075	0.57	+0.1
3,277,328	-		ABIE51_RS15075	0.57	-0.1
3,277,388	-		ABIE51_RS15075	0.61	+0.6
3,277,388	-		ABIE51_RS15075	0.61	-2.7
3,277,388	-		ABIE51_RS15075	0.61	-0.3
3,277,451	-		ABIE51_RS15075	0.66	+0.2
3,277,451	-		ABIE51_RS15075	0.66	-2.2
3,277,451	-		ABIE51_RS15075	0.66	+0.4
3,277,451	-		ABIE51_RS15075	0.66	-0.4
3,277,451	-		ABIE51_RS15075	0.66	+1.2
3,277,453	+		ABIE51_RS15075	0.66	-0.2
3,277,453	+		ABIE51_RS15075	0.66	+0.1
3,277,462	+		ABIE51_RS15075	0.67	-1.1
3,277,463	-		ABIE51_RS15075	0.67	+0.1
3,277,693	+		ABIE51_RS15075	0.84	+0.4
3,277,693	+		ABIE51_RS15075	0.84	+0.3
3,277,717	+		ABIE51_RS15075	0.86	+0.6
3,277,717	+		ABIE51_RS15075	0.86	+1.0
3,277,717	+		ABIE51_RS15075	0.86	+0.2
3,277,718	-		ABIE51_RS15075	0.86	-1.2
3,277,718	-		ABIE51_RS15075	0.86	-0.2
3,277,718	-		ABIE51_RS15075	0.86	+0.8
3,277,765	+		ABIE51_RS15075	0.90	-0.7
3,277,765	+		ABIE51_RS15075	0.90	-0.3
3,277,765	+		ABIE51_RS15075	0.90	-0.2
3,277,766	-				+0.1
3,277,766	-				-0.1
3,277,766	-				+0.9
3,277,766	-				-0.3
3,277,768	+				-0.1
3,277,769	-				+0.5
3,277,769	-				+1.0
3,278,156	+		ABIE51_RS15080	0.26	-0.1
3,278,156	+		ABIE51_RS15080	0.26	+0.5
3,278,156	+		ABIE51_RS15080	0.26	+0.5
3,278,156	+		ABIE51_RS15080	0.26	+0.6
3,278,157	-		ABIE51_RS15080	0.26	-0.3
3,278,157	-		ABIE51_RS15080	0.26	+0.3
3,278,157	-		ABIE51_RS15080	0.26	+0.1
3,278,481	+		ABIE51_RS15080	0.57	+0.4
3,278,482	-		ABIE51_RS15080	0.58	+0.5
3,278,751	+		ABIE51_RS15080	0.84	+0.6
3,278,752	-		ABIE51_RS15080	0.84	-0.4