Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS18545

Experiment: Ying_Nucleobase14 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep A; time point 1
4,039,448	+		ABIE51_RS18540	0.13	-0.6
4,039,448	+		ABIE51_RS18540	0.13	-1.0
4,039,448	+		ABIE51_RS18540	0.13	-1.1
4,039,449	-		ABIE51_RS18540	0.14	-0.9
4,039,449	-		ABIE51_RS18540	0.14	-0.2
4,039,491	+		ABIE51_RS18540	0.21	+1.3
4,039,491	+		ABIE51_RS18540	0.21	-0.3
4,039,492	-		ABIE51_RS18540	0.21	+0.5
4,039,492	-		ABIE51_RS18540	0.21	-0.7
4,039,492	-		ABIE51_RS18540	0.21	-0.4
4,039,492	-		ABIE51_RS18540	0.21	-0.4
4,039,492	-		ABIE51_RS18540	0.21	-0.5
4,039,492	-		ABIE51_RS18540	0.21	-0.6
4,039,507	+		ABIE51_RS18540	0.24	-0.1
4,039,507	+		ABIE51_RS18540	0.24	-1.0
4,039,507	+		ABIE51_RS18540	0.24	-0.2
4,039,507	+		ABIE51_RS18540	0.24	-0.0
4,039,507	+		ABIE51_RS18540	0.24	-1.2
4,039,507	+		ABIE51_RS18540	0.24	+1.1
4,039,507	+		ABIE51_RS18540	0.24	+0.3
4,039,507	+		ABIE51_RS18540	0.24	-0.2
4,039,507	+		ABIE51_RS18540	0.24	+0.3
4,039,508	-		ABIE51_RS18540	0.24	-0.3
4,039,508	-		ABIE51_RS18540	0.24	-0.4
4,039,508	-		ABIE51_RS18540	0.24	+1.0
4,039,508	-		ABIE51_RS18540	0.24	-0.0
4,039,711	+		ABIE51_RS18540	0.59	+0.0
4,039,756	+		ABIE51_RS18540	0.67	-0.8
4,039,865	-		ABIE51_RS18540	0.86	+0.1
4,039,865	-		ABIE51_RS18540	0.86	-0.6
4,039,974	-				-0.2
4,040,053	+				-0.2
4,040,053	+				+0.1
4,040,053	+				+0.3
4,040,053	+				+0.0
4,040,053	+				-0.4
4,040,053	+				+1.2
4,040,053	+				-0.2
4,040,054	-				-1.0
4,040,054	-				+0.4
4,040,054	-				-0.8
4,040,054	-				+0.3
4,040,054	-				-0.3
4,040,147	-		ABIE51_RS18545	0.15	-0.0
4,040,175	+		ABIE51_RS18545	0.24	-0.2
4,040,175	+		ABIE51_RS18545	0.24	-1.1
4,040,493	+				-0.1
4,040,783	+		ABIE51_RS18550	0.51	-0.4
4,040,783	+		ABIE51_RS18550	0.51	-0.2
4,040,784	-		ABIE51_RS18550	0.51	+0.3
4,040,840	+		ABIE51_RS18550	0.64	-0.3
4,040,840	+		ABIE51_RS18550	0.64	-0.9
4,040,840	+		ABIE51_RS18550	0.64	-0.2
4,040,840	+		ABIE51_RS18550	0.64	-0.5
4,040,841	-		ABIE51_RS18550	0.64	-0.6
4,040,841	-		ABIE51_RS18550	0.64	+0.2
4,040,841	-		ABIE51_RS18550	0.64	+0.2