Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS15390

Experiment: Ying_Nucleobase14 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep A; time point 1
3,341,036	+				+0.4
3,341,037	-				-1.4
3,341,051	+				+0.3
3,341,051	+				-0.6
3,341,710	-				-0.2
3,341,710	-				+0.1
3,341,783	+				-0.6
3,341,787	+				+0.3
3,341,787	+				+0.3
3,341,787	+				-0.9
3,341,787	+				+0.4
3,341,788	-				-0.1
3,341,788	-				+0.4
3,341,788	-				-0.2
3,341,788	-				+0.3
3,342,201	+		ABIE51_RS15390	0.36	-0.9
3,342,201	+		ABIE51_RS15390	0.36	-0.2
3,342,202	-		ABIE51_RS15390	0.36	+0.8
3,342,499	-		ABIE51_RS15390	0.62	+0.6
3,343,446	+				+0.4
3,343,446	+				-0.6
3,343,446	+				-0.7
3,343,447	-				-0.1
3,343,447	-				-0.5
3,343,447	-				-0.5
3,343,447	-				-0.3
3,343,466	+				-1.4
3,343,466	+				+0.8
3,343,466	+				-0.6
3,343,466	+				+0.3
3,343,466	+				-0.1
3,343,466	+				-0.1
3,343,466	+				+0.2
3,343,467	-				+2.1
3,343,467	-				+0.6
3,343,467	-				+0.0
3,343,467	-				-0.2
3,343,471	+				-0.0
3,343,472	-				+1.4
3,343,691	+		ABIE51_RS15400	0.69	-0.1
3,343,691	+		ABIE51_RS15400	0.69	+1.4
3,343,691	+		ABIE51_RS15400	0.69	+0.3
3,343,805	+				+0.1
3,343,806	-				+0.8
3,343,806	-				+0.4
3,343,895	-		ABIE51_RS15405	0.14	-0.6
3,343,895	-		ABIE51_RS15405	0.14	+0.4