Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS09105

Experiment: Ying_Nucleobase14 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep A; time point 1
1,949,255	+		ABIE51_RS09100	0.56	+0.2
1,949,255	+		ABIE51_RS09100	0.56	+0.0
1,949,378	+		ABIE51_RS09100	0.67	-0.4
1,949,396	+		ABIE51_RS09100	0.68	-0.4
1,949,396	+		ABIE51_RS09100	0.68	-0.1
1,949,396	+		ABIE51_RS09100	0.68	+0.1
1,949,396	+		ABIE51_RS09100	0.68	-0.1
1,949,396	+		ABIE51_RS09100	0.68	+0.2
1,949,396	+		ABIE51_RS09100	0.68	-0.5
1,949,396	+		ABIE51_RS09100	0.68	-0.7
1,949,645	+		ABIE51_RS09100	0.90	-0.2
1,949,672	+				+0.0
1,949,672	+				+0.2
1,949,672	+				+0.4
1,949,672	+				+0.4
1,949,702	+				+0.1
1,949,703	-				-0.1
1,949,703	-				-0.1
1,949,703	-				-0.1
1,949,949	+				+0.4
1,949,950	-				-1.7
1,950,018	+				-0.8
1,950,200	-				+0.5
1,950,612	-				-0.8
1,950,898	+		ABIE51_RS09105	0.16	+0.6
1,950,899	-		ABIE51_RS09105	0.16	-0.1
1,950,977	-		ABIE51_RS09105	0.17	-1.3
1,950,985	+		ABIE51_RS09105	0.17	+1.2
1,951,067	-		ABIE51_RS09105	0.19	-1.0
1,951,114	+		ABIE51_RS09105	0.20	-0.8
1,951,115	-		ABIE51_RS09105	0.20	-0.3
1,951,639	+		ABIE51_RS09105	0.31	-1.3
1,952,107	+		ABIE51_RS09105	0.40	-1.6
1,952,447	-		ABIE51_RS09105	0.47	+0.3
1,952,449	+		ABIE51_RS09105	0.47	-1.3
1,952,450	-		ABIE51_RS09105	0.47	-2.0
1,952,450	-		ABIE51_RS09105	0.47	-1.4
1,952,908	+		ABIE51_RS09105	0.57	+0.5
1,953,310	+		ABIE51_RS09105	0.65	+1.5
1,953,499	+		ABIE51_RS09105	0.69	-1.8
1,953,836	-		ABIE51_RS09105	0.76	-0.6
1,954,037	-		ABIE51_RS09105	0.80	-0.9
1,954,094	-		ABIE51_RS09105	0.81	+1.2
1,954,118	-		ABIE51_RS09105	0.81	+0.6
1,954,291	+		ABIE51_RS09105	0.85	+1.2
1,954,292	-		ABIE51_RS09105	0.85	+1.1
1,954,481	-		ABIE51_RS09105	0.89	-1.3
1,954,699	+				-0.8
1,954,699	+				-1.3
1,954,700	-				+1.2
1,954,700	-				+0.3
1,954,738	+				-0.7
1,954,950	+				+0.3
1,954,950	+				+0.6
1,955,026	+				+0.2
1,955,027	-				+0.9
1,955,027	-				-0.4
1,955,091	+				+0.6
1,955,091	+				-0.1
1,955,285	+				+0.1
1,955,286	-				+0.0
1,955,286	-				-0.5
1,955,286	-				-0.1