Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS06535

Experiment: Ying_Nucleobase14 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep A; time point 1
1,391,392	+				+0.6
1,391,486	-				-0.5
1,391,496	+				+0.7
1,391,496	+				+0.1
1,391,496	+				-0.3
1,391,496	+				-0.3
1,391,497	-				-0.0
1,391,497	-				+0.2
1,391,497	-				+0.3
1,391,497	-				+0.3
1,391,497	-				-0.2
1,391,497	-				+0.4
1,391,516	+				+0.1
1,391,516	+				+0.2
1,391,517	-				+0.8
1,391,517	-				+0.2
1,391,529	+				+0.5
1,391,530	-				+0.8
1,391,530	-				-0.2
1,391,676	-				-0.1
1,391,676	-				+0.1
1,391,844	-				-0.5
1,391,844	-				-0.5
1,391,934	+				-0.9
1,391,934	+				-0.0
1,391,934	+				+1.9
1,391,935	-				-0.7
1,391,935	-				-0.8
1,391,935	-				-0.5
1,391,935	-				+0.2
1,392,059	+				-0.4
1,392,060	-				+0.3
1,392,060	-				-0.4
1,392,060	-				+0.8
1,392,304	-		ABIE51_RS06535	0.13	-0.4
1,392,318	-		ABIE51_RS06535	0.15	-1.4
1,392,399	+		ABIE51_RS06535	0.23	-0.8
1,392,495	+		ABIE51_RS06535	0.33	-0.9
1,392,495	+		ABIE51_RS06535	0.33	-0.3
1,392,495	+		ABIE51_RS06535	0.33	+0.4
1,392,495	+		ABIE51_RS06535	0.33	+0.3
1,392,496	-		ABIE51_RS06535	0.33	+0.2
1,392,496	-		ABIE51_RS06535	0.33	-0.7
1,392,496	-		ABIE51_RS06535	0.33	-1.2
1,392,496	-		ABIE51_RS06535	0.33	-0.7
1,392,496	-		ABIE51_RS06535	0.33	-0.4
1,392,665	+		ABIE51_RS06535	0.50	-1.0
1,392,665	+		ABIE51_RS06535	0.50	-1.4
1,392,999	+		ABIE51_RS06535	0.85	-0.4
1,392,999	+		ABIE51_RS06535	0.85	+0.2
1,393,000	-		ABIE51_RS06535	0.85	+0.1
1,393,182	+				-0.1
1,393,182	+				-0.5
1,393,183	-				-0.1
1,393,183	-				-0.3
1,393,255	-				-0.5
1,393,257	+				-0.8
1,393,259	+				-0.5
1,393,259	+				-0.6
1,393,263	+				-0.4
1,393,263	+				+1.3
1,393,263	+				-1.3
1,393,263	+				-0.2
1,393,263	+				+0.2
1,393,263	+				+0.4
1,393,264	-				-1.1
1,393,264	-				+2.2
1,393,264	-				+0.6
1,393,264	-				+0.2
1,393,264	-				-0.1
1,393,264	-				-0.2
1,393,264	-				+0.5
1,393,264	-				+0.9
1,393,264	-				+0.3
1,393,358	+		ABIE51_RS06540	0.26	+0.3
1,393,429	+		ABIE51_RS06540	0.52	-1.0
1,393,448	+		ABIE51_RS06540	0.59	-1.3
1,393,511	+		ABIE51_RS06540	0.82	+0.2
1,393,512	-		ABIE51_RS06540	0.82	+0.4
1,393,682	+				+0.1
1,393,683	-				-0.0