Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS17545

Experiment: Ying_OrganicAcid7 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 1
3,834,431	-		ABIE51_RS17540	0.53	+0.2
3,834,623	-		ABIE51_RS17540	0.64	-1.5
3,834,623	-		ABIE51_RS17540	0.64	-0.8
3,834,626	-		ABIE51_RS17540	0.65	-1.1
3,834,634	+		ABIE51_RS17540	0.65	-2.0
3,835,096	+				-1.3
3,835,097	-				-1.1
3,835,097	-				-0.7
3,835,520	+		ABIE51_RS17545	0.23	-0.5
3,835,521	-		ABIE51_RS17545	0.23	-1.6
3,835,703	+		ABIE51_RS17545	0.41	-1.2
3,835,703	+		ABIE51_RS17545	0.41	-1.3
3,835,703	+		ABIE51_RS17545	0.41	-1.3
3,835,704	-		ABIE51_RS17545	0.41	-1.1
3,835,704	-		ABIE51_RS17545	0.41	-0.8
3,835,754	+		ABIE51_RS17545	0.46	-1.4
3,835,754	+		ABIE51_RS17545	0.46	-1.7
3,835,754	+		ABIE51_RS17545	0.46	-0.6
3,835,907	+		ABIE51_RS17545	0.61	-1.3
3,835,925	+		ABIE51_RS17545	0.63	-1.4
3,835,926	-		ABIE51_RS17545	0.63	-1.3
3,835,926	-		ABIE51_RS17545	0.63	-0.9
3,835,970	+		ABIE51_RS17545	0.67	-2.0
3,835,971	-		ABIE51_RS17545	0.67	-1.6
3,836,045	+		ABIE51_RS17545	0.75	-1.4
3,836,045	+		ABIE51_RS17545	0.75	-0.3
3,836,045	+		ABIE51_RS17545	0.75	-0.3
3,836,046	-		ABIE51_RS17545	0.75	-1.3
3,836,046	-		ABIE51_RS17545	0.75	-1.4
3,836,046	-		ABIE51_RS17545	0.75	-2.0
3,836,046	-		ABIE51_RS17545	0.75	-1.0
3,836,135	+		ABIE51_RS17545	0.83	-1.0
3,836,135	+		ABIE51_RS17545	0.83	-1.0
3,836,136	-		ABIE51_RS17545	0.84	-1.5
3,836,136	-		ABIE51_RS17545	0.84	-2.2
3,836,156	+		ABIE51_RS17545	0.86	-1.3
3,836,156	+		ABIE51_RS17545	0.86	-0.3
3,836,157	-		ABIE51_RS17545	0.86	-1.1
3,836,157	-		ABIE51_RS17545	0.86	-0.8
3,836,392	+				-1.6
3,836,392	+				-0.7
3,836,392	+				-1.2
3,836,393	-				-1.1
3,836,393	-				-0.6
3,836,393	-				-0.5
3,836,470	+				-0.3
3,836,471	-				-1.1
3,836,498	+		ABIE51_RS17550	0.11	-1.5
3,836,499	-		ABIE51_RS17550	0.11	-2.6
3,836,499	-		ABIE51_RS17550	0.11	+0.2