Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS16185

Experiment: Ying_OrganicAcid7 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 1
3,510,086	+		ABIE51_RS16180	0.17	+0.1
3,510,087	-		ABIE51_RS16180	0.17	+0.4
3,510,140	-		ABIE51_RS16180	0.22	+0.1
3,510,406	+		ABIE51_RS16180	0.46	-0.3
3,510,406	+		ABIE51_RS16180	0.46	+0.2
3,510,407	-		ABIE51_RS16180	0.46	-0.2
3,510,413	+		ABIE51_RS16180	0.47	+0.5
3,510,538	+		ABIE51_RS16180	0.58	-0.1
3,510,539	-		ABIE51_RS16180	0.58	+0.1
3,510,837	+		ABIE51_RS16180	0.86	+0.6
3,510,838	-		ABIE51_RS16180	0.86	+0.0
3,510,838	-		ABIE51_RS16180	0.86	-0.1
3,510,838	-		ABIE51_RS16180	0.86	+0.7
3,510,838	-		ABIE51_RS16180	0.86	+0.3
3,510,838	-		ABIE51_RS16180	0.86	+0.9
3,510,838	-		ABIE51_RS16180	0.86	-0.3
3,510,838	-		ABIE51_RS16180	0.86	+0.2
3,510,838	-		ABIE51_RS16180	0.86	-0.1
3,511,581	+		ABIE51_RS16185	0.50	-1.3
3,511,581	+		ABIE51_RS16185	0.50	+0.3
3,511,605	+		ABIE51_RS16185	0.52	-0.9
3,511,606	-		ABIE51_RS16185	0.52	-0.3
3,511,606	-		ABIE51_RS16185	0.52	-1.5
3,511,876	-		ABIE51_RS16185	0.74	-0.7
3,512,046	+		ABIE51_RS16185	0.89	-1.6
3,512,047	-		ABIE51_RS16185	0.89	-1.2
3,512,047	-		ABIE51_RS16185	0.89	-1.0
3,512,324	+		ABIE51_RS16190	0.14	-1.0
3,512,324	+		ABIE51_RS16190	0.14	-1.8
3,512,325	-		ABIE51_RS16190	0.14	-1.4
3,512,325	-		ABIE51_RS16190	0.14	-1.0
3,512,439	-		ABIE51_RS16190	0.24	-1.5
3,512,439	-		ABIE51_RS16190	0.24	-1.2
3,512,466	-		ABIE51_RS16190	0.27	-2.2
3,512,489	+		ABIE51_RS16190	0.29	-1.4
3,512,489	+		ABIE51_RS16190	0.29	-0.6
3,512,678	+		ABIE51_RS16190	0.47	-1.7
3,512,803	+		ABIE51_RS16190	0.59	-0.3
3,512,803	+		ABIE51_RS16190	0.59	-1.8
3,512,804	-		ABIE51_RS16190	0.59	-1.3
3,512,804	-		ABIE51_RS16190	0.59	+0.3
3,513,063	-		ABIE51_RS16190	0.83	-1.2