Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS12150

Experiment: Ying_OrganicAcid7 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 1
2,621,110	-		ABIE51_RS12145	0.30	-1.7
2,621,220	+		ABIE51_RS12145	0.39	-0.7
2,621,221	-		ABIE51_RS12145	0.39	-1.0
2,621,268	+		ABIE51_RS12145	0.43	-1.7
2,621,268	+		ABIE51_RS12145	0.43	-1.3
2,621,269	-		ABIE51_RS12145	0.43	-1.4
2,621,515	-		ABIE51_RS12145	0.63	-2.8
2,621,515	-		ABIE51_RS12145	0.63	-2.5
2,621,553	+		ABIE51_RS12145	0.66	-1.6
2,621,694	+		ABIE51_RS12145	0.78	+0.0
2,621,694	+		ABIE51_RS12145	0.78	-0.5
2,621,695	-		ABIE51_RS12145	0.78	-1.6
2,621,695	-		ABIE51_RS12145	0.78	-2.2
2,621,697	+		ABIE51_RS12145	0.78	-1.3
2,621,698	-		ABIE51_RS12145	0.78	-2.1
2,622,136	+				+0.1
2,622,136	+				-1.0
2,622,137	-				-3.3
2,622,137	-				-0.4
2,622,137	-				-1.3
2,622,295	+		ABIE51_RS12150	0.21	-0.6
2,622,295	+		ABIE51_RS12150	0.21	+0.1
2,622,296	-		ABIE51_RS12150	0.21	-1.2
2,622,325	+		ABIE51_RS12150	0.24	+0.3
2,622,325	+		ABIE51_RS12150	0.24	-0.1
2,622,325	+		ABIE51_RS12150	0.24	-1.3
2,622,326	-		ABIE51_RS12150	0.24	-2.2
2,622,472	+		ABIE51_RS12150	0.38	+0.1
2,622,472	+		ABIE51_RS12150	0.38	-1.2
2,622,472	+		ABIE51_RS12150	0.38	-1.5
2,622,473	-		ABIE51_RS12150	0.38	-2.3
2,622,578	-		ABIE51_RS12150	0.47	-0.6
2,622,709	+		ABIE51_RS12150	0.59	-1.1
2,622,709	+		ABIE51_RS12150	0.59	-1.3
2,622,709	+		ABIE51_RS12150	0.59	-1.1
2,622,709	+		ABIE51_RS12150	0.59	-0.5
2,622,710	-		ABIE51_RS12150	0.60	-0.6
2,622,710	-		ABIE51_RS12150	0.60	-0.5
2,622,710	-		ABIE51_RS12150	0.60	-0.7
2,622,710	-		ABIE51_RS12150	0.60	-0.9
2,622,718	+		ABIE51_RS12150	0.60	-0.2
2,622,718	+		ABIE51_RS12150	0.60	-1.4
2,622,718	+		ABIE51_RS12150	0.60	-1.7
2,622,811	+		ABIE51_RS12150	0.69	-0.9
2,622,811	+		ABIE51_RS12150	0.69	-3.1
2,622,811	+		ABIE51_RS12150	0.69	-1.6
2,622,811	+		ABIE51_RS12150	0.69	-1.0
2,622,812	-		ABIE51_RS12150	0.69	-1.7
2,622,812	-		ABIE51_RS12150	0.69	-1.4
2,622,812	-		ABIE51_RS12150	0.69	-0.9
2,622,812	-		ABIE51_RS12150	0.69	-1.2
2,622,862	+		ABIE51_RS12150	0.74	-1.4
2,622,862	+		ABIE51_RS12150	0.74	-0.4
2,622,862	+		ABIE51_RS12150	0.74	-0.8
2,622,862	+		ABIE51_RS12150	0.74	-0.7
2,622,863	-		ABIE51_RS12150	0.74	-1.7
2,622,863	-		ABIE51_RS12150	0.74	-0.0
2,622,863	-		ABIE51_RS12150	0.74	-1.2
2,622,863	-		ABIE51_RS12150	0.74	-0.6
2,622,950	-		ABIE51_RS12150	0.82	-3.9
2,622,950	-		ABIE51_RS12150	0.82	-1.0
2,623,202	+				-0.2
2,623,202	+				+0.5
2,623,202	+				-0.1
2,623,203	-				-0.5
2,623,203	-				-0.5
2,623,203	-				-0.5
2,623,203	-				-0.1
2,623,269	+				-1.2
2,623,269	+				-0.3
2,623,269	+				-0.7
2,623,269	+				-0.3
2,623,269	+				+0.7
2,623,269	+				-0.2
2,623,269	+				+0.2
2,623,269	+				+0.1
2,623,270	-				+0.1
2,623,270	-				-0.6
2,623,270	-				-1.0
2,623,270	-				+0.0
2,623,270	-				-0.9
2,623,270	-				+0.4
2,623,270	-				+0.4
2,623,271	+				+0.1
2,623,271	+				+0.5
2,623,271	+				-0.3
2,623,271	+				-0.3
2,623,272	-				+0.1
2,623,272	-				-0.1
2,623,272	-				-0.4
2,623,272	-				-0.0
2,623,272	-				-0.3
2,623,272	-				-1.0
2,623,272	-				-0.4
2,623,272	-				+0.2
2,623,396	+				-0.3
2,623,397	-				-0.5
2,623,570	+		ABIE51_RS12155	0.24	-0.1
2,623,570	+		ABIE51_RS12155	0.24	+0.4
2,623,570	+		ABIE51_RS12155	0.24	+0.9
2,623,570	+		ABIE51_RS12155	0.24	-0.3
2,623,570	+		ABIE51_RS12155	0.24	+0.3
2,623,571	-		ABIE51_RS12155	0.24	+0.5
2,623,571	-		ABIE51_RS12155	0.24	-0.0
2,623,571	-		ABIE51_RS12155	0.24	-0.8
2,623,571	-		ABIE51_RS12155	0.24	+1.1
2,623,571	-		ABIE51_RS12155	0.24	+0.0
2,623,571	-		ABIE51_RS12155	0.24	-0.2
2,623,582	+		ABIE51_RS12155	0.25	-0.1
2,623,583	-		ABIE51_RS12155	0.25	+0.3
2,623,583	-		ABIE51_RS12155	0.25	-0.8
2,623,583	-		ABIE51_RS12155	0.25	-0.1
2,623,736	-		ABIE51_RS12155	0.41	-0.2
2,623,736	-		ABIE51_RS12155	0.41	-0.0
2,623,837	+		ABIE51_RS12155	0.51	-0.5
2,623,837	+		ABIE51_RS12155	0.51	-0.4
2,623,837	+		ABIE51_RS12155	0.51	+0.7
2,623,837	+		ABIE51_RS12155	0.51	-0.1
2,623,838	-		ABIE51_RS12155	0.51	-0.3
2,623,838	-		ABIE51_RS12155	0.51	-0.3
2,623,838	-		ABIE51_RS12155	0.51	+0.2
2,623,838	-		ABIE51_RS12155	0.51	+0.0
2,623,838	-		ABIE51_RS12155	0.51	-0.1
2,623,838	-		ABIE51_RS12155	0.51	-0.4
2,623,909	+		ABIE51_RS12155	0.59	-1.1
2,623,973	-		ABIE51_RS12155	0.65	-0.3
2,624,032	+		ABIE51_RS12155	0.72	+0.5
2,624,122	+		ABIE51_RS12155	0.81	-0.7
2,624,123	-		ABIE51_RS12155	0.81	-0.0
2,624,123	-		ABIE51_RS12155	0.81	+0.4
2,624,123	-		ABIE51_RS12155	0.81	-0.7
2,624,123	-		ABIE51_RS12155	0.81	+0.5