Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS11490

Experiment: Ying_OrganicAcid7 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 1
2,483,128	+		ABIE51_RS11485	0.55	+0.5
2,483,128	+		ABIE51_RS11485	0.55	+0.1
2,483,129	-		ABIE51_RS11485	0.55	+0.1
2,483,129	-		ABIE51_RS11485	0.55	+0.6
2,483,129	-		ABIE51_RS11485	0.55	+0.4
2,483,129	-		ABIE51_RS11485	0.55	-0.1
2,483,178	+		ABIE51_RS11485	0.58	-0.3
2,483,178	+		ABIE51_RS11485	0.58	-0.5
2,483,178	+		ABIE51_RS11485	0.58	+0.9
2,483,178	+		ABIE51_RS11485	0.58	+0.2
2,483,178	+		ABIE51_RS11485	0.58	-0.1
2,483,178	+		ABIE51_RS11485	0.58	+0.1
2,483,178	+		ABIE51_RS11485	0.58	+0.1
2,483,178	+		ABIE51_RS11485	0.58	-0.1
2,483,179	-		ABIE51_RS11485	0.58	+0.2
2,483,179	-		ABIE51_RS11485	0.58	-0.1
2,483,179	-		ABIE51_RS11485	0.58	-0.3
2,483,192	+		ABIE51_RS11485	0.59	+0.1
2,483,198	+		ABIE51_RS11485	0.60	+0.1
2,483,198	+		ABIE51_RS11485	0.60	+0.5
2,483,198	+		ABIE51_RS11485	0.60	-0.4
2,483,198	+		ABIE51_RS11485	0.60	-0.2
2,483,198	+		ABIE51_RS11485	0.60	-0.3
2,483,198	+		ABIE51_RS11485	0.60	-0.2
2,483,198	+		ABIE51_RS11485	0.60	+0.1
2,483,198	+		ABIE51_RS11485	0.60	+0.8
2,483,198	+		ABIE51_RS11485	0.60	-0.6
2,483,198	+		ABIE51_RS11485	0.60	+0.3
2,483,199	-		ABIE51_RS11485	0.60	+0.1
2,483,199	-		ABIE51_RS11485	0.60	+0.1
2,483,199	-		ABIE51_RS11485	0.60	-0.1
2,483,199	-		ABIE51_RS11485	0.60	+0.3
2,483,199	-		ABIE51_RS11485	0.60	+0.8
2,483,199	-		ABIE51_RS11485	0.60	+1.1
2,483,199	-		ABIE51_RS11485	0.60	+1.6
2,483,199	-		ABIE51_RS11485	0.60	+0.1
2,483,199	-		ABIE51_RS11485	0.60	+0.0
2,483,199	-		ABIE51_RS11485	0.60	-0.5
2,483,199	-		ABIE51_RS11485	0.60	+0.6
2,483,199	-		ABIE51_RS11485	0.60	-0.2
2,483,199	-		ABIE51_RS11485	0.60	-0.0
2,483,199	-		ABIE51_RS11485	0.60	+0.1
2,483,199	-		ABIE51_RS11485	0.60	-0.2
2,483,199	-		ABIE51_RS11485	0.60	+0.3
2,483,199	-		ABIE51_RS11485	0.60	-0.8
2,483,199	-		ABIE51_RS11485	0.60	+0.1
2,483,199	-		ABIE51_RS11485	0.60	-0.1
2,483,199	-		ABIE51_RS11485	0.60	+0.0
2,483,301	+		ABIE51_RS11485	0.68	-0.3
2,483,301	+		ABIE51_RS11485	0.68	-1.1
2,483,302	-		ABIE51_RS11485	0.68	-0.2
2,483,302	-		ABIE51_RS11485	0.68	-0.1
2,483,302	-		ABIE51_RS11485	0.68	+0.1
2,483,379	+		ABIE51_RS11485	0.73	+0.5
2,483,379	+		ABIE51_RS11485	0.73	-0.1
2,483,379	+		ABIE51_RS11485	0.73	-0.4
2,483,379	+		ABIE51_RS11485	0.73	+0.2
2,483,379	+		ABIE51_RS11485	0.73	+0.1
2,483,380	-		ABIE51_RS11485	0.73	+1.1
2,483,635	-				-0.0
2,483,635	-				+1.2
2,483,635	-				-0.1
2,483,646	+				+0.5
2,483,646	+				+0.2
2,483,646	+				+0.2
2,483,647	-				-2.2
2,483,647	-				+0.0
2,483,647	-				-0.7
2,483,793	+				+0.1
2,483,794	-				+0.5
2,483,794	-				-1.1
2,484,461	+		ABIE51_RS11490	0.29	-0.8
2,484,461	+		ABIE51_RS11490	0.29	-1.2
2,484,461	+		ABIE51_RS11490	0.29	-0.4
2,484,461	+		ABIE51_RS11490	0.29	-0.6
2,484,461	+		ABIE51_RS11490	0.29	-1.4
2,484,461	+		ABIE51_RS11490	0.29	-0.1
2,484,461	+		ABIE51_RS11490	0.29	-1.7
2,484,461	+		ABIE51_RS11490	0.29	-1.5
2,484,462	-		ABIE51_RS11490	0.29	-1.1
2,484,462	-		ABIE51_RS11490	0.29	-0.9
2,484,462	-		ABIE51_RS11490	0.29	+0.3
2,484,462	-		ABIE51_RS11490	0.29	-1.2
2,484,462	-		ABIE51_RS11490	0.29	-0.8
2,484,507	+		ABIE51_RS11490	0.31	-1.3
2,484,507	+		ABIE51_RS11490	0.31	-0.9
2,484,507	+		ABIE51_RS11490	0.31	-1.0
2,484,508	-		ABIE51_RS11490	0.31	-1.5
2,484,508	-		ABIE51_RS11490	0.31	-1.4
2,484,508	-		ABIE51_RS11490	0.31	-1.3
2,484,508	-		ABIE51_RS11490	0.31	-1.0
2,484,508	-		ABIE51_RS11490	0.31	-1.3
2,484,508	-		ABIE51_RS11490	0.31	-1.4
2,484,508	-		ABIE51_RS11490	0.31	-1.7
2,484,508	-		ABIE51_RS11490	0.31	-1.5
2,484,508	-		ABIE51_RS11490	0.31	-1.9
2,484,508	-		ABIE51_RS11490	0.31	-1.3
2,484,509	+		ABIE51_RS11490	0.31	-2.5
2,484,509	+		ABIE51_RS11490	0.31	-1.3
2,484,509	+		ABIE51_RS11490	0.31	-1.4
2,484,509	+		ABIE51_RS11490	0.31	-1.0
2,484,509	+		ABIE51_RS11490	0.31	-0.3
2,484,509	+		ABIE51_RS11490	0.31	-1.1
2,484,509	+		ABIE51_RS11490	0.31	-1.7
2,484,509	+		ABIE51_RS11490	0.31	-1.4
2,484,509	+		ABIE51_RS11490	0.31	-0.7
2,484,509	+		ABIE51_RS11490	0.31	-0.9
2,484,509	+		ABIE51_RS11490	0.31	-1.2
2,484,509	+		ABIE51_RS11490	0.31	-1.4
2,484,509	+		ABIE51_RS11490	0.31	-2.0
2,484,509	+		ABIE51_RS11490	0.31	-1.0
2,484,509	+		ABIE51_RS11490	0.31	-0.9
2,484,509	+		ABIE51_RS11490	0.31	-1.2
2,484,510	-		ABIE51_RS11490	0.31	-1.3
2,484,510	-		ABIE51_RS11490	0.31	-1.8
2,484,510	-		ABIE51_RS11490	0.31	-1.2
2,484,510	-		ABIE51_RS11490	0.31	-0.7
2,484,510	-		ABIE51_RS11490	0.31	-1.9
2,484,510	-		ABIE51_RS11490	0.31	-0.3
2,484,510	-		ABIE51_RS11490	0.31	-0.5
2,484,510	-		ABIE51_RS11490	0.31	-0.9
2,484,510	-		ABIE51_RS11490	0.31	-1.6
2,484,510	-		ABIE51_RS11490	0.31	-1.4
2,484,510	-		ABIE51_RS11490	0.31	-1.8
2,484,510	-		ABIE51_RS11490	0.31	-0.7
2,484,510	-		ABIE51_RS11490	0.31	-0.6
2,484,510	-		ABIE51_RS11490	0.31	-0.8
2,484,510	-		ABIE51_RS11490	0.31	-0.6
2,484,510	-		ABIE51_RS11490	0.31	+0.2
2,484,675	+		ABIE51_RS11490	0.38	-0.6
2,484,962	+		ABIE51_RS11490	0.50	-1.9
2,484,962	+		ABIE51_RS11490	0.50	-1.4
2,484,962	+		ABIE51_RS11490	0.50	-1.4
2,484,962	+		ABIE51_RS11490	0.50	-1.8
2,484,962	+		ABIE51_RS11490	0.50	-2.0
2,484,963	-		ABIE51_RS11490	0.50	-2.1
2,484,986	+		ABIE51_RS11490	0.51	-1.3
2,484,986	+		ABIE51_RS11490	0.51	+0.4
2,484,986	+		ABIE51_RS11490	0.51	-1.9
2,484,986	+		ABIE51_RS11490	0.51	-0.3
2,484,986	+		ABIE51_RS11490	0.51	-0.7
2,484,987	-		ABIE51_RS11490	0.52	-0.3
2,484,987	-		ABIE51_RS11490	0.52	-0.6
2,484,987	-		ABIE51_RS11490	0.52	-0.7
2,484,987	-		ABIE51_RS11490	0.52	-1.2
2,484,987	-		ABIE51_RS11490	0.52	-1.3
2,484,987	-		ABIE51_RS11490	0.52	-0.2
2,485,016	+		ABIE51_RS11490	0.53	-0.9
2,485,017	-		ABIE51_RS11490	0.53	-1.8
2,485,017	-		ABIE51_RS11490	0.53	-1.1
2,485,100	+		ABIE51_RS11490	0.56	-0.8
2,485,100	+		ABIE51_RS11490	0.56	-1.9
2,485,100	+		ABIE51_RS11490	0.56	-1.2
2,485,304	+		ABIE51_RS11490	0.65	-0.9
2,485,304	+		ABIE51_RS11490	0.65	-1.2
2,485,305	-		ABIE51_RS11490	0.65	-1.4
2,485,305	-		ABIE51_RS11490	0.65	-0.7
2,485,305	-		ABIE51_RS11490	0.65	-0.9
2,485,305	-		ABIE51_RS11490	0.65	-2.7
2,485,343	+		ABIE51_RS11490	0.67	-1.5
2,485,343	+		ABIE51_RS11490	0.67	-0.9
2,485,343	+		ABIE51_RS11490	0.67	-0.9
2,485,343	+		ABIE51_RS11490	0.67	-1.5
2,485,343	+		ABIE51_RS11490	0.67	-2.8
2,485,343	+		ABIE51_RS11490	0.67	-2.0
2,485,344	-		ABIE51_RS11490	0.67	-1.4
2,485,344	-		ABIE51_RS11490	0.67	-0.8
2,485,344	-		ABIE51_RS11490	0.67	-1.9
2,485,344	-		ABIE51_RS11490	0.67	-2.3
2,485,344	-		ABIE51_RS11490	0.67	-1.4
2,485,344	-		ABIE51_RS11490	0.67	-2.2
2,485,344	-		ABIE51_RS11490	0.67	-0.1
2,485,344	-		ABIE51_RS11490	0.67	-1.4
2,485,344	-		ABIE51_RS11490	0.67	-0.7
2,485,445	+		ABIE51_RS11490	0.72	-1.1
2,485,445	+		ABIE51_RS11490	0.72	-1.3
2,485,445	+		ABIE51_RS11490	0.72	-0.7
2,485,445	+		ABIE51_RS11490	0.72	-1.4
2,485,445	+		ABIE51_RS11490	0.72	-0.8
2,485,446	-		ABIE51_RS11490	0.72	-1.2
2,485,446	-		ABIE51_RS11490	0.72	-1.4
2,485,446	-		ABIE51_RS11490	0.72	-0.3
2,485,446	-		ABIE51_RS11490	0.72	-1.1
2,485,446	-		ABIE51_RS11490	0.72	-1.4
2,485,446	-		ABIE51_RS11490	0.72	-1.3
2,485,446	-		ABIE51_RS11490	0.72	-1.3
2,485,688	+		ABIE51_RS11490	0.82	-1.4
2,485,688	+		ABIE51_RS11490	0.82	+1.2
2,485,688	+		ABIE51_RS11490	0.82	-3.1
2,485,688	+		ABIE51_RS11490	0.82	-0.6
2,485,688	+		ABIE51_RS11490	0.82	-1.5
2,485,688	+		ABIE51_RS11490	0.82	-2.2
2,485,688	+		ABIE51_RS11490	0.82	-0.8
2,485,688	+		ABIE51_RS11490	0.82	-1.4
2,485,688	+		ABIE51_RS11490	0.82	-1.5
2,485,688	+		ABIE51_RS11490	0.82	-2.1
2,485,689	-		ABIE51_RS11490	0.82	-1.3
2,485,689	-		ABIE51_RS11490	0.82	-1.0
2,485,689	-		ABIE51_RS11490	0.82	-1.4
2,485,689	-		ABIE51_RS11490	0.82	-0.6
2,485,689	-		ABIE51_RS11490	0.82	-0.3
2,485,689	-		ABIE51_RS11490	0.82	-1.7
2,485,689	-		ABIE51_RS11490	0.82	-2.2
2,485,689	-		ABIE51_RS11490	0.82	-1.3
2,485,689	-		ABIE51_RS11490	0.82	-1.1
2,485,689	-		ABIE51_RS11490	0.82	-1.1
2,485,733	+		ABIE51_RS11490	0.84	-1.6
2,485,733	+		ABIE51_RS11490	0.84	-1.6
2,485,733	+		ABIE51_RS11490	0.84	-1.3
2,485,733	+		ABIE51_RS11490	0.84	-1.3
2,485,733	+		ABIE51_RS11490	0.84	+0.2
2,485,734	-		ABIE51_RS11490	0.84	-2.1
2,485,734	-		ABIE51_RS11490	0.84	-1.6
2,485,734	-		ABIE51_RS11490	0.84	-1.3
2,485,734	-		ABIE51_RS11490	0.84	-1.9
2,485,734	-		ABIE51_RS11490	0.84	-1.6
2,485,820	+		ABIE51_RS11490	0.88	-0.8
2,485,820	+		ABIE51_RS11490	0.88	-1.5
2,485,820	+		ABIE51_RS11490	0.88	-3.1
2,485,820	+		ABIE51_RS11490	0.88	-3.2
2,485,821	-		ABIE51_RS11490	0.88	-0.8
2,485,866	+				-1.8
2,485,866	+				-1.8
2,485,867	-				-0.7
2,486,024	+				-0.6
2,486,024	+				-1.6
2,486,024	+				-1.1
2,486,024	+				-1.1
2,486,024	+				-0.9
2,486,024	+				-2.4
2,486,024	+				-1.4
2,486,024	+				-1.7
2,486,024	+				-1.8
2,486,024	+				-0.8
2,486,025	-				-0.7
2,486,025	-				-1.0
2,486,025	-				-0.1
2,486,025	-				-0.4
2,486,025	-				-2.1
2,486,025	-				-1.9
2,486,025	-				-1.9
2,486,025	-				-1.4
2,486,054	+				-1.5
2,486,054	+				-1.1
2,486,054	+				-0.9
2,486,054	+				-1.2
2,486,054	+				-1.7
2,486,054	+				-1.8
2,486,054	+				-0.5
2,486,054	+				-1.1
2,486,055	-				-1.5
2,486,055	-				-1.6
2,486,055	-				-1.1
2,486,055	-				-0.2
2,486,055	-				-1.1
2,486,055	-				-0.8
2,486,055	-				-0.9
2,486,055	-				-2.1
2,486,072	+				-0.8
2,486,072	+				-1.3
2,486,072	+				-1.1
2,486,073	-				-3.0
2,486,073	-				-0.8
2,486,102	+				-0.3
2,486,102	+				-0.8
2,486,102	+				-1.5
2,486,102	+				-1.1
2,486,102	+				-0.5
2,486,102	+				-0.8
2,486,103	-				+0.1
2,486,103	-				+0.2
2,486,103	-				+0.2
2,486,118	+				-0.3
2,486,119	-				+0.1
2,486,119	-				+0.4
2,486,119	-				-0.3
2,486,119	-				+0.2
2,486,119	-				-0.4
2,486,119	-				+0.9
2,486,129	+				-1.0
2,486,129	+				-1.3
2,486,129	+				-0.9
2,486,129	+				-1.2
2,486,129	+				-0.5
2,486,130	-				-0.1
2,486,130	-				+0.4
2,486,154	-				+0.3
2,486,205	+				-1.2
2,486,219	+				-0.1
2,486,219	+				-0.1
2,486,219	+				-1.1
2,486,219	+				-0.2
2,486,219	+				-0.2
2,486,219	+				-0.2
2,486,219	+				+0.1
2,486,219	+				-0.2
2,486,220	-				-0.4
2,486,220	-				-0.2
2,486,220	-				+0.4
2,486,235	+				+0.1
2,486,235	+				-0.7
2,486,356	+		ABIE51_RS11495	0.38	-1.0
2,486,357	-		ABIE51_RS11495	0.38	-2.3
2,486,445	+		ABIE51_RS11495	0.66	-1.5
2,486,445	+		ABIE51_RS11495	0.66	-1.3
2,486,446	-		ABIE51_RS11495	0.66	-0.7
2,486,446	-		ABIE51_RS11495	0.66	-0.2
2,486,472	+		ABIE51_RS11495	0.74	-0.4
2,486,473	-		ABIE51_RS11495	0.74	-1.4
2,486,473	-		ABIE51_RS11495	0.74	-0.4
2,486,473	-		ABIE51_RS11495	0.74	-1.4
2,486,473	-		ABIE51_RS11495	0.74	-0.4
2,486,473	-		ABIE51_RS11495	0.74	-0.9
2,486,473	-		ABIE51_RS11495	0.74	-0.7
2,486,516	+		ABIE51_RS11495	0.88	+0.5
2,486,516	+		ABIE51_RS11495	0.88	-0.4
2,486,564	+				-0.6
2,486,564	+				-0.9
2,486,564	+				+0.6
2,486,565	-				+0.2
2,486,565	-				-0.1
2,486,565	-				-0.3
2,486,565	-				-0.5
2,486,565	-				-0.0
2,486,565	-				-0.2
2,486,565	-				-0.3
2,486,566	+				+0.2
2,486,566	+				+1.1
2,486,566	+				+0.9
2,486,566	+				+0.3
2,486,566	+				-0.0
2,486,566	+				-0.1
2,486,567	-				+0.5
2,486,567	-				-0.3
2,486,567	-				+0.4
2,486,567	-				+0.0
2,486,567	-				+0.7
2,486,567	-				+0.2
2,486,567	-				+0.7
2,486,686	+				+0.3
2,486,686	+				+0.3
2,486,686	+				-0.0
2,486,686	+				+0.2
2,486,686	+				+0.0
2,486,687	-				+0.0
2,486,687	-				+0.1
2,486,687	-				+1.3
2,486,687	-				-0.0
2,486,687	-				+0.1
2,486,827	+		ABIE51_RS11500	0.28	-0.5
2,486,827	+		ABIE51_RS11500	0.28	-0.5
2,486,827	+		ABIE51_RS11500	0.28	+0.0
2,486,827	+		ABIE51_RS11500	0.28	-0.6
2,486,827	+		ABIE51_RS11500	0.28	+0.3
2,486,828	-		ABIE51_RS11500	0.28	-0.1
2,486,828	-		ABIE51_RS11500	0.28	+0.3
2,486,828	-		ABIE51_RS11500	0.28	-0.3
2,486,833	+		ABIE51_RS11500	0.29	+1.0
2,486,833	+		ABIE51_RS11500	0.29	+1.0
2,486,833	+		ABIE51_RS11500	0.29	+0.4
2,486,834	-		ABIE51_RS11500	0.29	-0.6
2,486,834	-		ABIE51_RS11500	0.29	-1.4
2,486,857	+		ABIE51_RS11500	0.34	+0.1
2,486,857	+		ABIE51_RS11500	0.34	+0.6
2,486,858	-		ABIE51_RS11500	0.34	+0.2
2,486,858	-		ABIE51_RS11500	0.34	-0.0
2,486,858	-		ABIE51_RS11500	0.34	+1.7
2,486,966	-		ABIE51_RS11500	0.55	+0.8
2,487,071	+		ABIE51_RS11500	0.76	+0.3
2,487,072	-		ABIE51_RS11500	0.76	-0.9
2,487,072	-		ABIE51_RS11500	0.76	+0.1