Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS09520

Experiment: Ying_OrganicAcid7 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 1
2,051,771	-		ABIE51_RS09515	0.28	-0.5
2,051,866	+		ABIE51_RS09515	0.37	-0.6
2,051,867	-		ABIE51_RS09515	0.37	+0.7
2,051,867	-		ABIE51_RS09515	0.37	+0.2
2,052,230	-		ABIE51_RS09515	0.72	-0.1
2,052,230	-		ABIE51_RS09515	0.72	-0.5
2,052,230	-		ABIE51_RS09515	0.72	+0.4
2,052,334	+		ABIE51_RS09515	0.82	-0.4
2,052,334	+		ABIE51_RS09515	0.82	-0.5
2,052,334	+		ABIE51_RS09515	0.82	-1.4
2,052,335	-		ABIE51_RS09515	0.82	-0.5
2,052,335	-		ABIE51_RS09515	0.82	-0.3
2,052,335	-		ABIE51_RS09515	0.82	-0.0
2,052,335	-		ABIE51_RS09515	0.82	-0.6
2,052,335	-		ABIE51_RS09515	0.82	-0.1
2,052,457	+				-0.2
2,052,553	+				-0.1
2,052,553	+				+0.5
2,052,553	+				+0.6
2,052,553	+				+0.4
2,052,567	+				-0.2
2,052,568	-				+0.1
2,052,757	+				-2.4
2,052,757	+				-1.5
2,052,757	+				-2.4
2,052,758	-				-2.0
2,052,758	-				-2.1
2,052,758	-				-2.0
2,052,765	+				-1.6
2,052,765	+				-0.4
2,052,765	+				-1.4
2,052,766	-				-1.9
2,052,766	-				-2.5
2,052,766	-				-2.0
2,053,168	-		ABIE51_RS09520	0.23	-1.9
2,053,168	-		ABIE51_RS09520	0.23	-2.5
2,053,168	-		ABIE51_RS09520	0.23	-1.2
2,053,168	-		ABIE51_RS09520	0.23	-2.7
2,053,168	-		ABIE51_RS09520	0.23	-1.0
2,053,218	+		ABIE51_RS09520	0.25	-2.0
2,053,342	-		ABIE51_RS09520	0.31	-0.5
2,053,363	-		ABIE51_RS09520	0.32	-2.5
2,053,617	+		ABIE51_RS09520	0.42	-1.6
2,053,712	+		ABIE51_RS09520	0.46	-1.8
2,053,928	+		ABIE51_RS09520	0.55	-1.8
2,053,928	+		ABIE51_RS09520	0.55	+0.1
2,053,929	-		ABIE51_RS09520	0.55	-1.3
2,053,956	+		ABIE51_RS09520	0.56	-0.5
2,054,074	-		ABIE51_RS09520	0.61	-1.2
2,054,074	-		ABIE51_RS09520	0.61	-1.5
2,054,199	+		ABIE51_RS09520	0.67	-0.4
2,054,200	-		ABIE51_RS09520	0.67	-2.5
2,054,200	-		ABIE51_RS09520	0.67	-1.9
2,054,200	-		ABIE51_RS09520	0.67	-0.4
2,054,200	-		ABIE51_RS09520	0.67	-0.7
2,054,274	+		ABIE51_RS09520	0.70	-2.5
2,054,280	+		ABIE51_RS09520	0.70	+0.4
2,054,280	+		ABIE51_RS09520	0.70	-1.6
2,054,280	+		ABIE51_RS09520	0.70	-1.7
2,054,280	+		ABIE51_RS09520	0.70	-1.2
2,054,280	+		ABIE51_RS09520	0.70	-1.5
2,054,281	-		ABIE51_RS09520	0.70	-2.0
2,054,281	-		ABIE51_RS09520	0.70	-1.7
2,054,281	-		ABIE51_RS09520	0.70	-1.8
2,054,281	-		ABIE51_RS09520	0.70	-1.3
2,054,332	-		ABIE51_RS09520	0.72	-2.2
2,054,332	-		ABIE51_RS09520	0.72	-1.4
2,054,332	-		ABIE51_RS09520	0.72	-2.0
2,054,332	-		ABIE51_RS09520	0.72	-2.3
2,054,332	-		ABIE51_RS09520	0.72	-2.1
2,054,332	-		ABIE51_RS09520	0.72	-0.9
2,054,481	+		ABIE51_RS09520	0.78	-2.4
2,054,502	+		ABIE51_RS09520	0.79	-2.1
2,054,502	+		ABIE51_RS09520	0.79	-0.3
2,054,503	-		ABIE51_RS09520	0.79	-2.0
2,054,676	+		ABIE51_RS09520	0.87	-1.8
2,054,677	-		ABIE51_RS09520	0.87	-1.6
2,054,677	-		ABIE51_RS09520	0.87	-1.7
2,054,677	-		ABIE51_RS09520	0.87	-0.9
2,054,677	-		ABIE51_RS09520	0.87	-2.4
2,054,802	+				-0.8
2,054,803	-				-1.4
2,054,803	-				-1.6
2,054,803	-				-1.5
2,054,803	-				-1.6
2,054,824	+				-0.2
2,054,824	+				+0.1
2,054,825	-				-1.6
2,054,825	-				-2.2
2,055,016	+		ABIE51_RS09525	0.19	+0.3
2,055,016	+		ABIE51_RS09525	0.19	+0.2
2,055,016	+		ABIE51_RS09525	0.19	-0.3
2,055,016	+		ABIE51_RS09525	0.19	-0.2
2,055,016	+		ABIE51_RS09525	0.19	-0.7
2,055,016	+		ABIE51_RS09525	0.19	-0.9
2,055,016	+		ABIE51_RS09525	0.19	-0.5
2,055,017	-		ABIE51_RS09525	0.19	+0.4
2,055,017	-		ABIE51_RS09525	0.19	+0.4
2,055,017	-		ABIE51_RS09525	0.19	-0.3
2,055,017	-		ABIE51_RS09525	0.19	-0.4
2,055,017	-		ABIE51_RS09525	0.19	-0.8
2,055,017	-		ABIE51_RS09525	0.19	+0.0
2,055,017	-		ABIE51_RS09525	0.19	+0.4
2,055,102	-		ABIE51_RS09525	0.67	+0.3
2,055,209	+				-1.2
2,055,209	+				-2.1
2,055,209	+				-1.5
2,055,209	+				-0.6
2,055,209	+				-0.3
2,055,209	+				-0.4
2,055,209	+				-1.0
2,055,209	+				-0.6
2,055,209	+				-0.4
2,055,209	+				-0.1
2,055,210	-				+0.6
2,055,210	-				+0.1
2,055,210	-				-0.9
2,055,210	-				+0.1
2,055,210	-				-0.9
2,055,210	-				+0.9
2,055,210	-				+0.1
2,055,210	-				+0.4
2,055,214	-				-0.1
2,055,368	+		ABIE51_RS09530	0.22	+0.6
2,055,368	+		ABIE51_RS09530	0.22	-1.1
2,055,368	+		ABIE51_RS09530	0.22	+1.0
2,055,368	+		ABIE51_RS09530	0.22	-3.2
2,055,551	+		ABIE51_RS09530	0.45	-0.2
2,055,552	-		ABIE51_RS09530	0.45	-1.0
2,055,552	-		ABIE51_RS09530	0.45	+0.1
2,055,614	+		ABIE51_RS09530	0.52	-0.3
2,055,614	+		ABIE51_RS09530	0.52	-0.1
2,055,677	+		ABIE51_RS09530	0.60	+0.7
2,055,677	+		ABIE51_RS09530	0.60	-0.9
2,055,677	+		ABIE51_RS09530	0.60	-0.5
2,055,678	-		ABIE51_RS09530	0.60	-0.8
2,055,678	-		ABIE51_RS09530	0.60	+0.3
2,055,678	-		ABIE51_RS09530	0.60	-0.5
2,055,693	-		ABIE51_RS09530	0.62	-0.7
2,055,713	+		ABIE51_RS09530	0.64	-0.4
2,055,714	-		ABIE51_RS09530	0.64	-0.2
2,055,714	-		ABIE51_RS09530	0.64	-1.2
2,055,714	-		ABIE51_RS09530	0.64	-1.2
2,055,852	-		ABIE51_RS09530	0.81	-0.5
2,055,940	+				+0.8
2,055,940	+				-0.4
2,055,940	+				-0.3
2,055,940	+				+0.2
2,055,941	-				-0.2
2,055,941	-				+0.1
2,055,941	-				+0.0