Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS09065

Experiment: Ying_OrganicAcid7 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 1
1,938,015	-				-0.0
1,938,015	-				-0.2
1,938,291	+		ABIE51_RS09060	0.23	-0.5
1,938,291	+		ABIE51_RS09060	0.23	-0.5
1,938,291	+		ABIE51_RS09060	0.23	+0.1
1,938,291	+		ABIE51_RS09060	0.23	-0.5
1,938,291	+		ABIE51_RS09060	0.23	-0.8
1,938,291	+		ABIE51_RS09060	0.23	+0.3
1,938,292	-		ABIE51_RS09060	0.23	+0.0
1,938,292	-		ABIE51_RS09060	0.23	-0.9
1,938,292	-		ABIE51_RS09060	0.23	-0.3
1,938,292	-		ABIE51_RS09060	0.23	-0.3
1,938,292	-		ABIE51_RS09060	0.23	-0.3
1,938,292	-		ABIE51_RS09060	0.23	-0.6
1,938,292	-		ABIE51_RS09060	0.23	-0.4
1,938,636	+		ABIE51_RS09060	0.67	+0.3
1,938,637	-		ABIE51_RS09060	0.67	+0.2
1,938,637	-		ABIE51_RS09060	0.67	-0.5
1,938,891	+				+1.2
1,938,892	-				-0.2
1,938,892	-				-0.1
1,938,892	-				+0.1
1,938,892	-				-0.3
1,938,892	-				+0.5
1,938,892	-				-0.0
1,938,902	+				+0.0
1,938,902	+				+1.1
1,938,982	+				+0.7
1,938,983	-				-0.1
1,938,983	-				+0.3
1,939,016	+				-2.7
1,939,016	+				-3.4
1,939,016	+				-1.8
1,939,017	-				-2.4
1,939,020	+				-2.5
1,939,020	+				-2.3
1,939,020	+				-1.2
1,939,020	+				-2.3
1,939,021	-				-1.9
1,939,021	-				-2.3
1,939,021	-				-2.8
1,939,021	-				-3.2
1,939,021	-				-3.5
1,939,021	-				-3.6
1,939,127	+		ABIE51_RS09065	0.10	-2.8
1,939,127	+		ABIE51_RS09065	0.10	-2.4
1,939,127	+		ABIE51_RS09065	0.10	-2.1
1,939,128	-		ABIE51_RS09065	0.10	-2.6
1,939,280	+		ABIE51_RS09065	0.22	-4.7
1,939,280	+		ABIE51_RS09065	0.22	-3.2
1,939,280	+		ABIE51_RS09065	0.22	-2.6
1,939,280	+		ABIE51_RS09065	0.22	-3.2
1,939,280	+		ABIE51_RS09065	0.22	-3.3
1,939,280	+		ABIE51_RS09065	0.22	-2.0
1,939,281	-		ABIE51_RS09065	0.22	-1.5
1,939,281	-		ABIE51_RS09065	0.22	-1.9
1,939,306	-		ABIE51_RS09065	0.24	-3.3
1,939,551	-		ABIE51_RS09065	0.42	-1.4
1,939,619	+		ABIE51_RS09065	0.47	-0.9
1,939,701	+		ABIE51_RS09065	0.53	-1.2
1,939,701	+		ABIE51_RS09065	0.53	-1.7
1,939,702	-		ABIE51_RS09065	0.53	-1.3
1,939,702	-		ABIE51_RS09065	0.53	-1.9
1,939,702	-		ABIE51_RS09065	0.53	-2.7
1,939,702	-		ABIE51_RS09065	0.53	-3.2
1,939,702	-		ABIE51_RS09065	0.53	-1.6
1,939,757	+		ABIE51_RS09065	0.57	-1.8
1,939,757	+		ABIE51_RS09065	0.57	-2.8
1,939,758	-		ABIE51_RS09065	0.57	-2.7
1,939,758	-		ABIE51_RS09065	0.57	-1.6
1,939,758	-		ABIE51_RS09065	0.57	-1.7
1,939,758	-		ABIE51_RS09065	0.57	-2.9
1,939,772	+		ABIE51_RS09065	0.58	-1.2
1,939,835	+		ABIE51_RS09065	0.63	-2.6
1,939,916	+		ABIE51_RS09065	0.69	-2.1
1,939,916	+		ABIE51_RS09065	0.69	-2.6
1,939,916	+		ABIE51_RS09065	0.69	-4.4
1,939,917	-		ABIE51_RS09065	0.69	-2.6
1,939,917	-		ABIE51_RS09065	0.69	-2.6
1,940,051	+		ABIE51_RS09065	0.79	-3.7
1,940,052	-		ABIE51_RS09065	0.79	-2.1
1,940,052	-		ABIE51_RS09065	0.79	-3.7
1,940,253	-				-2.6
1,940,253	-				-2.6
1,940,253	-				-1.9
1,940,289	-				-2.3
1,940,289	-				-1.8
1,940,291	+				-1.6
1,940,498	+		ABIE51_RS09070	0.70	-0.3
1,940,498	+		ABIE51_RS09070	0.70	-0.2
1,940,498	+		ABIE51_RS09070	0.70	+0.4
1,940,498	+		ABIE51_RS09070	0.70	+0.2
1,940,499	-		ABIE51_RS09070	0.70	-0.6
1,940,499	-		ABIE51_RS09070	0.70	+0.0
1,940,565	+				-0.1
1,940,565	+				-0.2
1,940,566	-				+1.3
1,940,566	-				+0.1
1,940,624	-				+1.3
1,940,624	-				+0.3
1,940,625	+				-0.3
1,940,625	+				-0.1
1,940,625	+				-0.1
1,940,625	+				+0.1
1,940,625	+				-0.2
1,940,625	+				-0.1
1,940,625	+				+0.4
1,940,626	-				-0.3
1,940,626	-				-0.1
1,940,626	-				+0.1
1,940,931	+		ABIE51_RS09075	0.40	-0.4
1,940,931	+		ABIE51_RS09075	0.40	+0.1
1,940,932	-		ABIE51_RS09075	0.40	+0.3
1,940,932	-		ABIE51_RS09075	0.40	+1.0
1,940,932	-		ABIE51_RS09075	0.40	+0.7
1,941,117	+		ABIE51_RS09075	0.68	-0.9
1,941,117	+		ABIE51_RS09075	0.68	+0.2
1,941,117	+		ABIE51_RS09075	0.68	-0.1
1,941,117	+		ABIE51_RS09075	0.68	-0.3
1,941,117	+		ABIE51_RS09075	0.68	-0.2
1,941,118	-		ABIE51_RS09075	0.68	+0.2
1,941,118	-		ABIE51_RS09075	0.68	-0.4
1,941,118	-		ABIE51_RS09075	0.68	+0.0
1,941,288	+				-0.2
1,941,303	+				-0.9