Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS15195

Experiment: Ying_AminoAcid20 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 1
3,300,186	+		ABIE51_RS15190	0.26	+0.1
3,300,186	+		ABIE51_RS15190	0.26	+0.4
3,300,187	-		ABIE51_RS15190	0.26	+0.6
3,300,187	-		ABIE51_RS15190	0.26	+0.2
3,300,188	+		ABIE51_RS15190	0.26	-0.4
3,300,188	+		ABIE51_RS15190	0.26	+1.0
3,300,188	+		ABIE51_RS15190	0.26	+0.9
3,300,188	+		ABIE51_RS15190	0.26	+0.1
3,300,189	-		ABIE51_RS15190	0.26	-1.0
3,300,500	+		ABIE51_RS15190	0.55	-0.0
3,300,501	-		ABIE51_RS15190	0.55	-0.6
3,300,530	+		ABIE51_RS15190	0.58	-0.4
3,300,530	+		ABIE51_RS15190	0.58	+0.4
3,300,531	-		ABIE51_RS15190	0.58	+0.6
3,300,531	-		ABIE51_RS15190	0.58	+0.3
3,300,531	-		ABIE51_RS15190	0.58	-0.1
3,300,531	-		ABIE51_RS15190	0.58	+0.8
3,300,531	-		ABIE51_RS15190	0.58	-0.2
3,300,531	-		ABIE51_RS15190	0.58	+0.6
3,300,560	+		ABIE51_RS15190	0.61	-0.1
3,300,560	+		ABIE51_RS15190	0.61	-0.0
3,300,560	+		ABIE51_RS15190	0.61	+0.6
3,300,560	+		ABIE51_RS15190	0.61	+0.4
3,300,560	+		ABIE51_RS15190	0.61	+0.9
3,300,560	+		ABIE51_RS15190	0.61	+0.3
3,300,561	-		ABIE51_RS15190	0.61	+1.3
3,300,561	-		ABIE51_RS15190	0.61	+0.5
3,300,561	-		ABIE51_RS15190	0.61	+0.3
3,300,561	-		ABIE51_RS15190	0.61	+0.2
3,300,784	+		ABIE51_RS15190	0.82	-1.0
3,300,785	-		ABIE51_RS15190	0.82	-0.1
3,300,785	-		ABIE51_RS15190	0.82	-0.6
3,300,969	+				+0.6
3,300,970	-				+0.1
3,301,196	+		ABIE51_RS15195	0.25	+0.4
3,301,321	+		ABIE51_RS15195	0.51	+0.1
3,301,321	+		ABIE51_RS15195	0.51	+0.4
3,301,322	-		ABIE51_RS15195	0.51	-0.1
3,301,322	-		ABIE51_RS15195	0.51	+0.4
3,301,472	+		ABIE51_RS15195	0.83	-0.5
3,301,472	+		ABIE51_RS15195	0.83	-0.4
3,301,562	+				+0.3
3,301,563	-				+0.9
3,301,563	-				-0.5
3,301,590	-				+0.1
3,301,590	-				+0.2
3,301,590	-				+1.2
3,301,597	-				+1.2
3,301,597	-				-0.2
3,301,669	+				-0.1
3,301,669	+				+0.2
3,301,669	+				-0.3
3,301,669	+				-0.0
3,301,669	+				-0.1
3,301,669	+				-0.1
3,301,669	+				-0.2
3,301,669	+				+0.1
3,301,670	-				-0.8
3,301,670	-				-0.5
3,301,717	+				-0.4
3,301,717	+				+0.0
3,301,933	+		ABIE51_RS15200	0.15	+0.4
3,302,216	+		ABIE51_RS15200	0.29	+0.7
3,302,216	+		ABIE51_RS15200	0.29	+0.1
3,302,216	+		ABIE51_RS15200	0.29	+0.5
3,302,216	+		ABIE51_RS15200	0.29	-0.1
3,302,216	+		ABIE51_RS15200	0.29	+0.2
3,302,217	-		ABIE51_RS15200	0.29	+1.0
3,302,434	+		ABIE51_RS15200	0.40	+0.8
3,302,435	-		ABIE51_RS15200	0.40	-0.1
3,302,435	-		ABIE51_RS15200	0.40	-0.1