Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS10080
Experiment: Ying_AminoAcid20 rep A; time point 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Ying_AminoAcid20 rep A; time point 1 |
---|---|---|---|---|---|
remove | |||||
2,170,226 | - | ABIE51_RS10075 | 0.50 | -0.5 | |
2,170,556 | + | ABIE51_RS10075 | 0.73 | -1.4 | |
2,170,556 | + | ABIE51_RS10075 | 0.73 | -0.4 | |
2,170,557 | - | ABIE51_RS10075 | 0.73 | -0.6 | |
2,170,670 | + | ABIE51_RS10075 | 0.81 | -0.3 | |
2,170,730 | + | ABIE51_RS10075 | 0.85 | +0.0 | |
2,170,730 | + | ABIE51_RS10075 | 0.85 | -0.2 | |
2,170,738 | - | ABIE51_RS10075 | 0.86 | -0.4 | |
2,170,738 | - | ABIE51_RS10075 | 0.86 | -0.4 | |
2,170,790 | + | ABIE51_RS10075 | 0.89 | +0.6 | |
2,170,811 | + | +0.1 | |||
2,170,856 | - | +0.1 | |||
2,171,289 | + | ABIE51_RS10080 | 0.26 | +0.1 | |
2,171,418 | + | ABIE51_RS10080 | 0.37 | +0.4 | |
2,171,475 | + | ABIE51_RS10080 | 0.41 | -0.1 | |
2,171,864 | + | ABIE51_RS10080 | 0.72 | -0.0 | |
2,171,865 | - | ABIE51_RS10080 | 0.72 | +0.8 | |
2,171,865 | - | ABIE51_RS10080 | 0.72 | -0.2 | |
2,171,874 | + | ABIE51_RS10080 | 0.73 | -0.3 | |
2,172,064 | - | ABIE51_RS10080 | 0.88 | -0.3 | |
2,172,064 | - | ABIE51_RS10080 | 0.88 | +0.2 | |
2,172,084 | + | ABIE51_RS10080 | 0.90 | +0.2 | |
2,172,085 | - | ABIE51_RS10080 | 0.90 | -0.6 | |
2,172,210 | + | +0.2 | |||
2,172,211 | - | +0.2 |
Or see this region's nucleotide sequence