Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS06125

Experiment: Ying_AminoAcid20 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 1
1,308,295	+		ABIE51_RS06115	0.82	+0.4
1,308,296	-		ABIE51_RS06115	0.82	+0.3
1,308,334	+		ABIE51_RS06115	0.86	+0.4
1,308,334	+		ABIE51_RS06115	0.86	+0.1
1,308,334	+		ABIE51_RS06115	0.86	+0.4
1,308,334	+		ABIE51_RS06115	0.86	-0.2
1,308,334	+		ABIE51_RS06115	0.86	+0.5
1,308,334	+		ABIE51_RS06115	0.86	+0.1
1,308,335	-		ABIE51_RS06115	0.86	+1.0
1,308,335	-		ABIE51_RS06115	0.86	-0.3
1,308,335	-		ABIE51_RS06115	0.86	+0.5
1,308,340	+		ABIE51_RS06115	0.87	+0.5
1,308,340	+		ABIE51_RS06115	0.87	+0.7
1,308,341	-		ABIE51_RS06115	0.87	+0.4
1,308,341	-		ABIE51_RS06115	0.87	+0.4
1,308,341	-		ABIE51_RS06115	0.87	+0.4
1,308,341	-		ABIE51_RS06115	0.87	+0.6
1,308,507	+				+0.5
1,308,507	+				+0.0
1,308,507	+				+0.5
1,308,507	+				+0.2
1,308,508	-				+0.8
1,308,508	-				+0.3
1,308,508	-				-1.3
1,308,508	-				+1.2
1,308,625	+				+1.1
1,308,626	-				+0.2
1,308,746	+		ABIE51_RS06120	0.17	+0.2
1,308,969	+		ABIE51_RS06120	0.62	+0.0
1,308,969	+		ABIE51_RS06120	0.62	+0.1
1,308,969	+		ABIE51_RS06120	0.62	-0.3
1,308,969	+		ABIE51_RS06120	0.62	+0.2
1,308,970	-		ABIE51_RS06120	0.62	+0.9
1,308,970	-		ABIE51_RS06120	0.62	-0.3
1,309,418	+		ABIE51_RS06125	0.33	+1.3
1,309,418	+		ABIE51_RS06125	0.33	+0.1
1,309,418	+		ABIE51_RS06125	0.33	+0.3
1,309,418	+		ABIE51_RS06125	0.33	+0.2
1,309,418	+		ABIE51_RS06125	0.33	+0.2
1,309,419	-		ABIE51_RS06125	0.33	+0.1
1,309,419	-		ABIE51_RS06125	0.33	+0.0
1,309,419	-		ABIE51_RS06125	0.33	+0.2
1,309,631	+		ABIE51_RS06125	0.59	+0.3
1,309,631	+		ABIE51_RS06125	0.59	-0.9
1,309,631	+		ABIE51_RS06125	0.59	-1.0
1,309,631	+		ABIE51_RS06125	0.59	+0.5
1,309,631	+		ABIE51_RS06125	0.59	+0.7
1,309,631	+		ABIE51_RS06125	0.59	+0.7
1,309,631	+		ABIE51_RS06125	0.59	+0.7
1,309,632	-		ABIE51_RS06125	0.59	-0.3
1,309,632	-		ABIE51_RS06125	0.59	+0.3
1,310,047	+				-0.1
1,310,047	+				-0.6
1,310,047	+				+0.4
1,310,048	-				+0.5
1,310,048	-				+0.9
1,310,048	-				+0.2
1,310,048	-				+0.1
1,310,048	-				-0.2
1,310,048	-				+0.5
1,310,150	+		ABIE51_RS06130	0.15	-0.3
1,310,151	-		ABIE51_RS06130	0.15	+0.8
1,310,298	+		ABIE51_RS06130	0.48	-0.5
1,310,325	+		ABIE51_RS06130	0.54	-0.4
1,310,325	+		ABIE51_RS06130	0.54	-1.1
1,310,326	-		ABIE51_RS06130	0.54	+2.4
1,310,326	-		ABIE51_RS06130	0.54	-0.5
1,310,326	-		ABIE51_RS06130	0.54	-0.8
1,310,326	-		ABIE51_RS06130	0.54	-0.8
1,310,526	+				+0.5
1,310,526	+				+0.2
1,310,526	+				+0.2
1,310,527	-				+0.5
1,310,756	+		ABIE51_RS06135	0.12	-0.2
1,310,756	+		ABIE51_RS06135	0.12	-0.8
1,310,756	+		ABIE51_RS06135	0.12	-0.0
1,310,756	+		ABIE51_RS06135	0.12	-0.6
1,310,756	+		ABIE51_RS06135	0.12	-0.6
1,310,757	-		ABIE51_RS06135	0.12	-0.2
1,310,757	-		ABIE51_RS06135	0.12	-0.1
1,310,757	-		ABIE51_RS06135	0.12	-0.2
1,310,757	-		ABIE51_RS06135	0.12	-0.5
1,310,757	-		ABIE51_RS06135	0.12	-0.7
1,310,757	-		ABIE51_RS06135	0.12	-0.8
1,310,810	+		ABIE51_RS06135	0.17	-0.4
1,310,810	+		ABIE51_RS06135	0.17	-0.8
1,310,810	+		ABIE51_RS06135	0.17	-0.0
1,310,811	-		ABIE51_RS06135	0.17	+0.1
1,310,811	-		ABIE51_RS06135	0.17	-0.6
1,310,885	+		ABIE51_RS06135	0.23	+0.2
1,310,885	+		ABIE51_RS06135	0.23	-0.4
1,310,886	-		ABIE51_RS06135	0.23	-0.7
1,310,886	-		ABIE51_RS06135	0.23	-0.4
1,310,886	-		ABIE51_RS06135	0.23	-0.6