Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS17530

Experiment: Ying_sugar7 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 1
3,831,235	+		ABIE51_RS17525	0.42	-2.1
3,831,236	-		ABIE51_RS17525	0.42	-3.6
3,831,236	-		ABIE51_RS17525	0.42	-3.7
3,831,237	+		ABIE51_RS17525	0.42	-3.2
3,831,238	-		ABIE51_RS17525	0.42	-2.5
3,831,238	-		ABIE51_RS17525	0.42	-3.1
3,831,238	-		ABIE51_RS17525	0.42	-2.2
3,831,238	-		ABIE51_RS17525	0.42	+0.7
3,831,238	-		ABIE51_RS17525	0.42	-3.4
3,831,441	+		ABIE51_RS17525	0.63	-2.1
3,831,748	-				-2.4
3,831,798	+				-0.3
3,831,798	+				-0.6
3,831,798	+				+0.5
3,831,891	-				-2.8
3,831,891	-				-2.0
3,831,971	+		ABIE51_RS17530	0.13	-4.4
3,831,971	+		ABIE51_RS17530	0.13	-3.8
3,831,972	-		ABIE51_RS17530	0.13	-3.5
3,832,116	-		ABIE51_RS17530	0.24	-1.5
3,832,116	-		ABIE51_RS17530	0.24	-2.3
3,832,182	+		ABIE51_RS17530	0.29	-4.6
3,832,265	+		ABIE51_RS17530	0.35	-3.1
3,832,469	+		ABIE51_RS17530	0.50	-2.4
3,832,470	-		ABIE51_RS17530	0.51	-3.9
3,832,472	+		ABIE51_RS17530	0.51	-3.6
3,832,473	-		ABIE51_RS17530	0.51	-1.9
3,832,473	-		ABIE51_RS17530	0.51	-4.0
3,832,473	-		ABIE51_RS17530	0.51	-2.6
3,832,473	-		ABIE51_RS17530	0.51	-4.3
3,832,640	+		ABIE51_RS17530	0.63	-2.8
3,832,659	-		ABIE51_RS17530	0.65	-3.5
3,832,659	-		ABIE51_RS17530	0.65	-2.4
3,832,659	-		ABIE51_RS17530	0.65	-3.6
3,833,080	+				+0.7
3,833,092	+				-0.7
3,833,092	+				-0.4
3,833,093	-				-0.9
3,833,093	-				-1.2
3,833,093	-				-0.5
3,833,341	+		ABIE51_RS17535	0.74	-5.2
3,833,342	-		ABIE51_RS17535	0.74	-2.8
3,833,342	-		ABIE51_RS17535	0.74	-2.3
3,833,348	-		ABIE51_RS17535	0.78	-4.2
3,833,348	-		ABIE51_RS17535	0.78	-2.5
3,833,348	-		ABIE51_RS17535	0.78	-3.6
3,833,348	-		ABIE51_RS17535	0.78	-2.4
3,833,351	+		ABIE51_RS17535	0.79	-2.3
3,833,351	+		ABIE51_RS17535	0.79	-0.3
3,833,351	+		ABIE51_RS17535	0.79	-3.9
3,833,351	+		ABIE51_RS17535	0.79	-2.3
3,833,352	-		ABIE51_RS17535	0.80	-4.6
3,833,352	-		ABIE51_RS17535	0.80	-0.1
3,833,352	-		ABIE51_RS17535	0.80	-3.9
3,833,377	-				-2.8
3,833,392	+				-4.0
3,833,392	+				-2.7
3,833,392	+				-2.1
3,833,392	+				-3.2
3,833,393	-				-4.3
3,833,393	-				-3.4
3,833,607	+				-3.4
3,833,607	+				-3.2
3,833,607	+				-3.6
3,833,607	+				-4.6
3,833,607	+				-3.7
3,833,608	-				-3.6
3,833,608	-				-4.4
3,833,608	-				-4.4
3,833,608	-				-2.8
3,833,608	-				-3.5
3,833,608	-				-4.0
3,833,608	-				-2.6
3,833,635	+				-6.3
3,833,635	+				-3.8
3,833,636	-				-2.1
3,833,636	-				-3.6
3,833,636	-				-3.1
3,833,636	-				-2.7
3,833,715	+		ABIE51_RS17540	0.13	-2.6
3,833,715	+		ABIE51_RS17540	0.13	-2.9
3,833,716	-		ABIE51_RS17540	0.13	-5.2
3,833,716	-		ABIE51_RS17540	0.13	-3.1