Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS11510

Experiment: Ying_sugar7 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 1
2,486,686	+				+0.6
2,486,686	+				+0.7
2,486,686	+				-0.0
2,486,686	+				-1.1
2,486,686	+				+0.4
2,486,687	-				+0.2
2,486,687	-				-1.7
2,486,687	-				+1.5
2,486,687	-				-0.0
2,486,687	-				+0.0
2,486,827	+		ABIE51_RS11500	0.28	+0.1
2,486,827	+		ABIE51_RS11500	0.28	-0.1
2,486,827	+		ABIE51_RS11500	0.28	+0.7
2,486,827	+		ABIE51_RS11500	0.28	+0.6
2,486,827	+		ABIE51_RS11500	0.28	-0.3
2,486,828	-		ABIE51_RS11500	0.28	-0.4
2,486,828	-		ABIE51_RS11500	0.28	+0.2
2,486,828	-		ABIE51_RS11500	0.28	-0.2
2,486,833	+		ABIE51_RS11500	0.29	+0.7
2,486,833	+		ABIE51_RS11500	0.29	+1.2
2,486,833	+		ABIE51_RS11500	0.29	+0.3
2,486,834	-		ABIE51_RS11500	0.29	+0.0
2,486,834	-		ABIE51_RS11500	0.29	+0.2
2,486,857	+		ABIE51_RS11500	0.34	+0.6
2,486,857	+		ABIE51_RS11500	0.34	+0.4
2,486,858	-		ABIE51_RS11500	0.34	-0.0
2,486,858	-		ABIE51_RS11500	0.34	-0.1
2,486,858	-		ABIE51_RS11500	0.34	+2.7
2,486,966	-		ABIE51_RS11500	0.55	+0.5
2,487,071	+		ABIE51_RS11500	0.76	+0.6
2,487,072	-		ABIE51_RS11500	0.76	-1.1
2,487,072	-		ABIE51_RS11500	0.76	+0.2
2,487,195	+				+0.1
2,487,195	+				-0.1
2,487,195	+				-0.0
2,487,195	+				+0.3
2,487,195	+				+0.5
2,487,195	+				+0.1
2,487,196	-				+0.2
2,487,196	-				-0.6
2,487,196	-				-0.9
2,487,196	-				-0.3
2,487,196	-				-0.1
2,487,385	-		ABIE51_RS11505	0.41	-0.3
2,487,415	-		ABIE51_RS11505	0.47	-0.6
2,487,415	-		ABIE51_RS11505	0.47	+0.0
2,487,415	-		ABIE51_RS11505	0.47	-0.8
2,487,462	+		ABIE51_RS11505	0.57	-0.3
2,487,462	+		ABIE51_RS11505	0.57	+0.3
2,487,463	-		ABIE51_RS11505	0.57	-0.1
2,487,463	-		ABIE51_RS11505	0.57	-0.4
2,487,463	-		ABIE51_RS11505	0.57	-0.2
2,487,463	-		ABIE51_RS11505	0.57	+0.0
2,487,463	-		ABIE51_RS11505	0.57	+0.1
2,487,463	-		ABIE51_RS11505	0.57	+0.4
2,487,463	-		ABIE51_RS11505	0.57	-0.9
2,487,463	-		ABIE51_RS11505	0.57	-0.4
2,487,463	-		ABIE51_RS11505	0.57	+0.3
2,487,463	-		ABIE51_RS11505	0.57	-0.3
2,487,840	+		ABIE51_RS11510	0.16	-1.1
2,487,890	+		ABIE51_RS11510	0.20	-2.8
2,487,926	+		ABIE51_RS11510	0.23	+0.7
2,487,927	-		ABIE51_RS11510	0.23	-2.8
2,488,040	+		ABIE51_RS11510	0.33	-2.5
2,488,040	+		ABIE51_RS11510	0.33	-1.3
2,488,040	+		ABIE51_RS11510	0.33	-2.5
2,488,041	-		ABIE51_RS11510	0.34	-0.1
2,488,093	+		ABIE51_RS11510	0.38	-2.3
2,488,093	+		ABIE51_RS11510	0.38	-1.4
2,488,094	-		ABIE51_RS11510	0.38	-2.0
2,488,094	-		ABIE51_RS11510	0.38	-2.3
2,488,094	-		ABIE51_RS11510	0.38	-2.2
2,488,094	-		ABIE51_RS11510	0.38	-0.6
2,488,112	+		ABIE51_RS11510	0.40	-2.0
2,488,112	+		ABIE51_RS11510	0.40	-1.8
2,488,112	+		ABIE51_RS11510	0.40	-1.2
2,488,112	+		ABIE51_RS11510	0.40	-2.1
2,488,113	-		ABIE51_RS11510	0.40	-2.3
2,488,113	-		ABIE51_RS11510	0.40	-2.5
2,488,113	-		ABIE51_RS11510	0.40	-2.2
2,488,113	-		ABIE51_RS11510	0.40	-2.2
2,488,113	-		ABIE51_RS11510	0.40	-3.1
2,488,113	-		ABIE51_RS11510	0.40	-2.5
2,488,113	-		ABIE51_RS11510	0.40	-2.7
2,488,113	-		ABIE51_RS11510	0.40	-2.2
2,488,293	-		ABIE51_RS11510	0.56	-3.4
2,488,321	+		ABIE51_RS11510	0.58	-1.4
2,488,321	+		ABIE51_RS11510	0.58	-2.3
2,488,321	+		ABIE51_RS11510	0.58	-2.2
2,488,321	+		ABIE51_RS11510	0.58	-1.3
2,488,322	-		ABIE51_RS11510	0.59	-2.6
2,488,364	+		ABIE51_RS11510	0.62	-1.4
2,488,364	+		ABIE51_RS11510	0.62	-1.7
2,488,365	-		ABIE51_RS11510	0.62	-2.5
2,488,365	-		ABIE51_RS11510	0.62	-0.3
2,488,365	-		ABIE51_RS11510	0.62	-3.8
2,488,365	-		ABIE51_RS11510	0.62	-1.3
2,488,433	+		ABIE51_RS11510	0.68	-2.7
2,488,433	+		ABIE51_RS11510	0.68	-1.5
2,488,434	-		ABIE51_RS11510	0.69	-2.2
2,488,434	-		ABIE51_RS11510	0.69	-3.7
2,488,434	-		ABIE51_RS11510	0.69	-1.2
2,488,434	-		ABIE51_RS11510	0.69	-0.9
2,488,434	-		ABIE51_RS11510	0.69	-4.0
2,488,469	+		ABIE51_RS11510	0.72	-3.4
2,488,469	+		ABIE51_RS11510	0.72	-1.8
2,488,470	-		ABIE51_RS11510	0.72	-4.0
2,488,470	-		ABIE51_RS11510	0.72	-1.9
2,488,470	-		ABIE51_RS11510	0.72	-2.1
2,488,470	-		ABIE51_RS11510	0.72	-1.7
2,488,470	-		ABIE51_RS11510	0.72	-4.1
2,488,470	-		ABIE51_RS11510	0.72	-3.3
2,488,470	-		ABIE51_RS11510	0.72	-1.4
2,488,700	+				-2.5
2,488,701	-				-2.6
2,488,701	-				-2.8
2,488,853	+				+0.6
2,488,853	+				+0.3
2,488,853	+				+0.1
2,488,854	-				-0.2
2,488,951	+		ABIE51_RS11515	0.25	-0.8
2,488,952	-		ABIE51_RS11515	0.25	+0.2
2,488,952	-		ABIE51_RS11515	0.25	+0.5
2,488,999	+		ABIE51_RS11515	0.33	-0.6
2,488,999	+		ABIE51_RS11515	0.33	+0.3
2,489,245	+		ABIE51_RS11515	0.74	+0.1
2,489,245	+		ABIE51_RS11515	0.74	-0.5
2,489,245	+		ABIE51_RS11515	0.74	+0.4
2,489,245	+		ABIE51_RS11515	0.74	-0.3
2,489,505	+				+0.3
2,489,505	+				+0.1
2,489,506	-				-0.5
2,489,506	-				+0.2
2,489,506	-				+0.2
2,489,588	+				-0.4
2,489,589	-				+0.2
2,489,595	+				+0.3
2,489,732	+				+0.4
2,489,733	-				+0.1
2,489,733	-				-0.9
2,489,773	+				+0.1