Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS12565

Experiment: Ying_sugar7 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep A; time point 1
2,715,111	-		ABIE51_RS12555	0.51	+0.2
2,715,111	-		ABIE51_RS12555	0.51	-0.3
2,715,125	+		ABIE51_RS12555	0.53	+0.3
2,715,125	+		ABIE51_RS12555	0.53	+0.9
2,715,125	+		ABIE51_RS12555	0.53	+0.1
2,715,126	-		ABIE51_RS12555	0.54	-0.1
2,715,126	-		ABIE51_RS12555	0.54	-1.3
2,715,293	+		ABIE51_RS12555	0.80	-0.1
2,715,410	+				+0.8
2,715,411	-				+0.2
2,715,411	-				+0.3
2,716,057	+				-0.4
2,716,057	+				-0.0
2,716,057	+				-0.2
2,716,057	+				+0.0
2,716,057	+				+0.7
2,716,058	-				-0.7
2,716,058	-				-0.6
2,716,058	-				+0.1
2,716,058	-				-0.4
2,716,058	-				-1.2
2,716,349	+		ABIE51_RS12565	0.31	-0.6
2,716,349	+		ABIE51_RS12565	0.31	-1.0
2,716,349	+		ABIE51_RS12565	0.31	-1.9
2,716,350	-		ABIE51_RS12565	0.31	-0.5
2,716,350	-		ABIE51_RS12565	0.31	-0.0
2,716,350	-		ABIE51_RS12565	0.31	-0.3
2,716,350	-		ABIE51_RS12565	0.31	+0.0
2,716,351	+		ABIE51_RS12565	0.31	-0.4
2,716,351	+		ABIE51_RS12565	0.31	+0.3
2,716,352	-		ABIE51_RS12565	0.31	-1.0
2,716,352	-		ABIE51_RS12565	0.31	-2.1
2,716,352	-		ABIE51_RS12565	0.31	+0.5
2,716,352	-		ABIE51_RS12565	0.31	-0.2
2,716,352	-		ABIE51_RS12565	0.31	+0.8
2,716,352	-		ABIE51_RS12565	0.31	-0.4
2,716,411	+		ABIE51_RS12565	0.36	-1.0
2,716,411	+		ABIE51_RS12565	0.36	-0.1
2,716,822	+		ABIE51_RS12565	0.71	-0.2
2,716,823	-		ABIE51_RS12565	0.72	-0.1
2,716,823	-		ABIE51_RS12565	0.72	-0.0
2,716,828	+		ABIE51_RS12565	0.72	-0.4
2,716,828	+		ABIE51_RS12565	0.72	+0.3
2,716,828	+		ABIE51_RS12565	0.72	-1.1
2,716,828	+		ABIE51_RS12565	0.72	-0.6
2,716,828	+		ABIE51_RS12565	0.72	+0.4
2,716,828	+		ABIE51_RS12565	0.72	-1.2
2,716,828	+		ABIE51_RS12565	0.72	-0.8
2,716,828	+		ABIE51_RS12565	0.72	-0.4
2,716,828	+		ABIE51_RS12565	0.72	-0.0
2,716,828	+		ABIE51_RS12565	0.72	+0.5
2,716,828	+		ABIE51_RS12565	0.72	-0.8
2,716,828	+		ABIE51_RS12565	0.72	+0.6
2,716,829	-		ABIE51_RS12565	0.72	-0.2
2,716,829	-		ABIE51_RS12565	0.72	-0.0
2,716,829	-		ABIE51_RS12565	0.72	+0.5
2,716,829	-		ABIE51_RS12565	0.72	+0.0
2,716,829	-		ABIE51_RS12565	0.72	+0.0
2,716,829	-		ABIE51_RS12565	0.72	-0.1
2,716,829	-		ABIE51_RS12565	0.72	-0.3
2,716,829	-		ABIE51_RS12565	0.72	-0.6
2,716,829	-		ABIE51_RS12565	0.72	-0.1
2,716,829	-		ABIE51_RS12565	0.72	-0.3
2,716,829	-		ABIE51_RS12565	0.72	-0.1
2,716,829	-		ABIE51_RS12565	0.72	+0.5
2,716,837	+		ABIE51_RS12565	0.73	-0.6
2,716,837	+		ABIE51_RS12565	0.73	-0.5
2,716,918	+		ABIE51_RS12565	0.80	-0.5
2,716,919	-		ABIE51_RS12565	0.80	-0.4
2,716,948	+		ABIE51_RS12565	0.82	-1.3
2,716,948	+		ABIE51_RS12565	0.82	-0.6
2,716,948	+		ABIE51_RS12565	0.82	-1.4
2,716,949	-		ABIE51_RS12565	0.82	-0.4
2,716,949	-		ABIE51_RS12565	0.82	-0.4
2,716,949	-		ABIE51_RS12565	0.82	-0.3
2,716,949	-		ABIE51_RS12565	0.82	+0.8
2,717,128	+				-0.5
2,717,128	+				-0.3
2,717,128	+				-0.7
2,717,128	+				-0.8
2,717,129	-				+0.7
2,717,129	-				-0.4
2,717,137	+				-0.1
2,717,137	+				-1.1
2,717,186	+				-0.3
2,717,186	+				+0.4
2,717,186	+				+0.1
2,717,186	+				-0.0
2,717,186	+				-0.5
2,717,187	-				+1.6
2,717,187	-				+0.4
2,717,187	-				-0.1
2,717,291	-				-0.8
2,717,305	+				-0.1
2,717,305	+				+0.1
2,717,305	+				-0.2
2,717,305	+				+0.2
2,717,305	+				+1.5
2,717,312	-				-0.0
2,717,312	-				+0.4
2,717,312	-				-0.0
2,717,312	-				+0.5
2,717,312	-				-0.2
2,717,444	+		ABIE51_RS12570	0.15	-0.6
2,717,444	+		ABIE51_RS12570	0.15	+0.1
2,717,445	-		ABIE51_RS12570	0.15	-0.3
2,717,445	-		ABIE51_RS12570	0.15	-0.9
2,717,450	+		ABIE51_RS12570	0.15	+0.2
2,717,450	+		ABIE51_RS12570	0.15	+0.5
2,717,450	+		ABIE51_RS12570	0.15	-1.5
2,717,450	+		ABIE51_RS12570	0.15	-0.0
2,717,451	-		ABIE51_RS12570	0.15	+0.4
2,717,451	-		ABIE51_RS12570	0.15	+0.4
2,717,555	+		ABIE51_RS12570	0.28	-0.3
2,717,555	+		ABIE51_RS12570	0.28	+0.5
2,717,555	+		ABIE51_RS12570	0.28	-0.2
2,717,555	+		ABIE51_RS12570	0.28	-0.2
2,717,555	+		ABIE51_RS12570	0.28	-0.1
2,717,555	+		ABIE51_RS12570	0.28	-0.8
2,717,567	+		ABIE51_RS12570	0.30	-0.2
2,717,567	+		ABIE51_RS12570	0.30	+0.2
2,717,568	-		ABIE51_RS12570	0.30	-0.3
2,717,568	-		ABIE51_RS12570	0.30	+0.2
2,717,739	-		ABIE51_RS12570	0.51	+0.1
2,717,900	+		ABIE51_RS12570	0.71	-0.0
2,717,900	+		ABIE51_RS12570	0.71	-0.3
2,717,900	+		ABIE51_RS12570	0.71	-0.0
2,717,901	-		ABIE51_RS12570	0.71	+0.2
2,717,929	+		ABIE51_RS12570	0.75	+0.5
2,717,929	+		ABIE51_RS12570	0.75	-0.2
2,717,929	+		ABIE51_RS12570	0.75	-0.2
2,717,929	+		ABIE51_RS12570	0.75	+0.1
2,717,929	+		ABIE51_RS12570	0.75	-0.3
2,717,929	+		ABIE51_RS12570	0.75	+0.4
2,717,929	+		ABIE51_RS12570	0.75	+0.7
2,717,930	-		ABIE51_RS12570	0.75	+0.6
2,717,930	-		ABIE51_RS12570	0.75	+0.2
2,717,930	-		ABIE51_RS12570	0.75	+0.4
2,717,948	+		ABIE51_RS12570	0.77	+0.1
2,717,949	-		ABIE51_RS12570	0.77	-0.1