Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS19030

Experiment: Ying_all64 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep B; time point 1
4,142,457	+				-0.9
4,142,457	+				+0.5
4,142,786	+		ABIE51_RS19025	0.30	-0.3
4,142,786	+		ABIE51_RS19025	0.30	+0.4
4,142,786	+		ABIE51_RS19025	0.30	+1.0
4,142,858	+		ABIE51_RS19025	0.39	+1.1
4,142,975	+		ABIE51_RS19025	0.53	+0.7
4,142,975	+		ABIE51_RS19025	0.53	-0.4
4,142,975	+		ABIE51_RS19025	0.53	-0.3
4,142,975	+		ABIE51_RS19025	0.53	+0.4
4,142,976	-		ABIE51_RS19025	0.53	-0.3
4,142,976	-		ABIE51_RS19025	0.53	+1.0
4,142,990	+		ABIE51_RS19025	0.55	+0.5
4,142,991	-		ABIE51_RS19025	0.55	+2.0
4,143,110	+		ABIE51_RS19025	0.70	+1.8
4,143,119	+		ABIE51_RS19025	0.71	+0.2
4,143,120	-		ABIE51_RS19025	0.71	+0.5
4,143,120	-		ABIE51_RS19025	0.71	-1.0
4,143,251	+		ABIE51_RS19025	0.87	-1.5
4,143,251	+		ABIE51_RS19025	0.87	+0.0
4,143,251	+		ABIE51_RS19025	0.87	+1.5
4,143,251	+		ABIE51_RS19025	0.87	+0.4
4,143,251	+		ABIE51_RS19025	0.87	-0.2
4,143,252	-		ABIE51_RS19025	0.87	-2.0
4,143,252	-		ABIE51_RS19025	0.87	-1.3
4,143,252	-		ABIE51_RS19025	0.87	-0.6
4,143,252	-		ABIE51_RS19025	0.87	-2.8
4,143,252	-		ABIE51_RS19025	0.87	-0.7
4,143,252	-		ABIE51_RS19025	0.87	-0.7
4,143,252	-		ABIE51_RS19025	0.87	-1.7
4,143,252	-		ABIE51_RS19025	0.87	-0.3
4,143,359	+				-0.3
4,143,359	+				-1.0
4,143,359	+				-1.3
4,143,360	-				-0.9
4,143,360	-				-1.6
4,143,442	-				-4.7
4,143,450	+				-3.3
4,143,450	+				-1.6
4,143,450	+				-4.6
4,143,450	+				-3.6
4,143,450	+				-1.2
4,143,451	-				-1.2
4,143,451	-				-2.1
4,143,451	-				-3.8
4,143,451	-				-5.0
4,143,603	+		ABIE51_RS19030	0.30	-2.8
4,143,603	+		ABIE51_RS19030	0.30	-1.5
4,143,603	+		ABIE51_RS19030	0.30	-3.4
4,143,604	-		ABIE51_RS19030	0.30	-2.3
4,143,604	-		ABIE51_RS19030	0.30	-1.8
4,143,604	-		ABIE51_RS19030	0.30	-4.4
4,143,604	-		ABIE51_RS19030	0.30	-1.5
4,143,631	-		ABIE51_RS19030	0.33	-0.2
4,143,771	+		ABIE51_RS19030	0.52	-0.0
4,143,983	+		ABIE51_RS19030	0.80	-0.8
4,143,983	+		ABIE51_RS19030	0.80	-0.8
4,143,983	+		ABIE51_RS19030	0.80	-2.0
4,143,983	+		ABIE51_RS19030	0.80	-2.3
4,143,983	+		ABIE51_RS19030	0.80	-2.9
4,143,983	+		ABIE51_RS19030	0.80	-3.7
4,143,983	+		ABIE51_RS19030	0.80	-4.1
4,143,984	-		ABIE51_RS19030	0.80	+0.4
4,143,984	-		ABIE51_RS19030	0.80	-1.3
4,143,984	-		ABIE51_RS19030	0.80	-0.0
4,143,984	-		ABIE51_RS19030	0.80	-3.6
4,143,984	-		ABIE51_RS19030	0.80	-2.1
4,143,984	-		ABIE51_RS19030	0.80	-1.5
4,143,984	-		ABIE51_RS19030	0.80	-1.1
4,143,984	-		ABIE51_RS19030	0.80	-1.3
4,143,984	-		ABIE51_RS19030	0.80	-3.5
4,143,984	-		ABIE51_RS19030	0.80	-2.3
4,144,270	-				-0.1
4,144,270	-				-0.2
4,144,293	+				-0.2
4,144,293	+				+0.5
4,144,293	+				-0.0
4,144,293	+				-0.3
4,144,293	+				+0.4
4,144,293	+				+0.1
4,144,293	+				-0.2
4,144,293	+				+0.3
4,144,294	-				-0.3
4,144,294	-				-0.2
4,144,294	-				-0.2
4,144,294	-				+0.5
4,144,294	-				+0.6
4,144,298	-				-0.4
4,144,298	-				-0.2
4,144,298	-				-0.2
4,144,298	-				-0.3
4,144,308	+				+0.4
4,144,308	+				-0.1
4,144,309	-				-0.3
4,144,309	-				-0.5
4,144,418	+				-0.1
4,144,418	+				-0.3
4,144,418	+				-0.1
4,144,418	+				+1.7
4,144,418	+				+0.0
4,144,418	+				-0.1
4,144,419	-				-0.0
4,144,419	-				+0.4
4,144,419	-				-1.4
4,144,419	-				-0.3
4,144,419	-				+0.4
4,144,419	-				-0.1
4,144,419	-				-0.4
4,144,419	-				-0.1
4,144,419	-				-0.4
4,144,419	-				-0.3
4,144,419	-				-0.7
4,144,419	-				+0.5
4,144,428	+				+0.2
4,144,429	-				-0.1
4,144,429	-				+0.5
4,144,429	-				+0.4
4,144,429	-				-0.3
4,144,429	-				-0.3
4,144,527	+				-0.9
4,144,527	+				-0.3
4,144,527	+				+0.1
4,144,528	-				-0.2
4,144,528	-				-0.3
4,144,668	+		ABIE51_RS19035	0.15	+0.6
4,144,680	+		ABIE51_RS19035	0.15	-1.2
4,144,680	+		ABIE51_RS19035	0.15	-0.1
4,144,680	+		ABIE51_RS19035	0.15	+0.2
4,144,680	+		ABIE51_RS19035	0.15	+0.7
4,144,680	+		ABIE51_RS19035	0.15	+0.3
4,144,681	-		ABIE51_RS19035	0.15	-0.5
4,144,681	-		ABIE51_RS19035	0.15	+0.0
4,144,681	-		ABIE51_RS19035	0.15	+0.8
4,144,681	-		ABIE51_RS19035	0.15	-0.9
4,144,681	-		ABIE51_RS19035	0.15	+0.5
4,144,681	-		ABIE51_RS19035	0.15	-0.3
4,144,681	-		ABIE51_RS19035	0.15	+0.8
4,144,681	-		ABIE51_RS19035	0.15	+0.2
4,144,932	+		ABIE51_RS19035	0.24	-0.4
4,144,933	-		ABIE51_RS19035	0.24	+0.6
4,144,933	-		ABIE51_RS19035	0.24	-0.4
4,144,933	-		ABIE51_RS19035	0.24	+0.6
4,144,933	-		ABIE51_RS19035	0.24	-0.1
4,144,933	-		ABIE51_RS19035	0.24	-0.0
4,144,933	-		ABIE51_RS19035	0.24	+0.1
4,144,935	+		ABIE51_RS19035	0.24	-0.7
4,144,935	+		ABIE51_RS19035	0.24	-0.3
4,144,935	+		ABIE51_RS19035	0.24	-0.5
4,144,935	+		ABIE51_RS19035	0.24	-0.1
4,144,935	+		ABIE51_RS19035	0.24	-0.1
4,144,935	+		ABIE51_RS19035	0.24	-0.4
4,144,936	-		ABIE51_RS19035	0.24	+0.4
4,144,936	-		ABIE51_RS19035	0.24	-0.5
4,144,936	-		ABIE51_RS19035	0.24	-0.2
4,144,936	-		ABIE51_RS19035	0.24	-0.2
4,144,936	-		ABIE51_RS19035	0.24	-0.1
4,144,936	-		ABIE51_RS19035	0.24	-1.0
4,144,936	-		ABIE51_RS19035	0.24	-0.7
4,144,936	-		ABIE51_RS19035	0.24	-0.1
4,144,936	-		ABIE51_RS19035	0.24	-0.4
4,144,995	+		ABIE51_RS19035	0.26	-0.1
4,144,995	+		ABIE51_RS19035	0.26	-1.6
4,144,995	+		ABIE51_RS19035	0.26	-0.0
4,144,996	-		ABIE51_RS19035	0.26	-0.3
4,145,013	+		ABIE51_RS19035	0.27	-0.2
4,145,013	+		ABIE51_RS19035	0.27	-0.4
4,145,013	+		ABIE51_RS19035	0.27	+0.2
4,145,013	+		ABIE51_RS19035	0.27	+0.4
4,145,013	+		ABIE51_RS19035	0.27	-0.4
4,145,013	+		ABIE51_RS19035	0.27	+0.3
4,145,013	+		ABIE51_RS19035	0.27	-0.3
4,145,013	+		ABIE51_RS19035	0.27	-0.1
4,145,013	+		ABIE51_RS19035	0.27	-0.6
4,145,013	+		ABIE51_RS19035	0.27	+0.4
4,145,013	+		ABIE51_RS19035	0.27	+1.4
4,145,014	-		ABIE51_RS19035	0.27	-1.4
4,145,014	-		ABIE51_RS19035	0.27	-0.8
4,145,014	-		ABIE51_RS19035	0.27	-0.1
4,145,014	-		ABIE51_RS19035	0.27	-0.3
4,145,014	-		ABIE51_RS19035	0.27	+0.2
4,145,014	-		ABIE51_RS19035	0.27	+0.5
4,145,014	-		ABIE51_RS19035	0.27	-0.5
4,145,014	-		ABIE51_RS19035	0.27	-0.6
4,145,048	-		ABIE51_RS19035	0.28	+0.3
4,145,048	-		ABIE51_RS19035	0.28	-0.8