Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS17515

Experiment: Ying_all64 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep B; time point 1
3,824,920	+				-0.4
3,824,920	+				+0.3
3,824,921	-				-0.3
3,824,921	-				-0.7
3,824,921	-				-0.3
3,824,921	-				-0.4
3,824,921	-				-0.1
3,824,923	+				-0.1
3,824,923	+				+0.3
3,824,923	+				+0.4
3,824,923	+				-0.5
3,824,924	-				-0.5
3,824,924	-				-1.0
3,824,924	-				-0.2
3,824,924	-				-1.0
3,824,924	-				-0.4
3,824,924	-				-0.5
3,824,932	+				+1.0
3,824,933	-				+0.7
3,824,933	-				-0.6
3,824,933	-				-0.4
3,824,933	-				+0.0
3,824,933	-				-2.7
3,824,933	-				-0.9
3,824,933	-				-0.4
3,825,041	+				-0.1
3,825,041	+				+0.7
3,825,041	+				+0.7
3,825,041	+				+0.4
3,825,042	-				-0.0
3,825,042	-				-0.6
3,825,042	-				-0.2
3,825,042	-				-0.5
3,825,042	-				-1.1
3,825,055	+				-0.5
3,825,056	-				-0.7
3,825,066	+				-0.2
3,825,066	+				-0.5
3,825,067	-				-1.1
3,825,067	-				-1.6
3,825,105	+				+0.5
3,825,105	+				+0.6
3,825,105	+				-0.2
3,825,106	-				-0.4
3,825,106	-				-0.5
3,825,106	-				-0.0
3,825,106	-				-0.6
3,825,106	-				-0.4
3,825,162	+				-1.2
3,825,162	+				-1.5
3,825,163	-				-0.9
3,825,163	-				-0.5
3,825,163	-				+0.4
3,825,163	-				-0.2
3,825,163	-				-1.6
3,825,351	+		ABIE51_RS17510	0.36	+0.0
3,825,351	+		ABIE51_RS17510	0.36	-0.6
3,825,352	-		ABIE51_RS17510	0.36	-0.5
3,825,352	-		ABIE51_RS17510	0.36	-0.9
3,825,352	-		ABIE51_RS17510	0.36	-0.4
3,825,352	-		ABIE51_RS17510	0.36	-0.1
3,825,352	-		ABIE51_RS17510	0.36	-0.2
3,825,357	+		ABIE51_RS17510	0.37	+0.1
3,825,441	+		ABIE51_RS17510	0.49	-0.8
3,825,441	+		ABIE51_RS17510	0.49	-0.5
3,825,441	+		ABIE51_RS17510	0.49	-0.3
3,825,441	+		ABIE51_RS17510	0.49	+0.3
3,825,441	+		ABIE51_RS17510	0.49	+0.1
3,825,442	-		ABIE51_RS17510	0.49	-0.4
3,825,442	-		ABIE51_RS17510	0.49	-0.1
3,825,442	-		ABIE51_RS17510	0.49	-0.5
3,825,442	-		ABIE51_RS17510	0.49	-0.1
3,825,442	-		ABIE51_RS17510	0.49	-0.7
3,825,442	-		ABIE51_RS17510	0.49	+0.2
3,825,442	-		ABIE51_RS17510	0.49	-0.3
3,825,442	-		ABIE51_RS17510	0.49	-0.2
3,825,465	+		ABIE51_RS17510	0.53	-0.4
3,825,465	+		ABIE51_RS17510	0.53	+0.1
3,825,465	+		ABIE51_RS17510	0.53	-0.6
3,825,465	+		ABIE51_RS17510	0.53	-0.3
3,825,465	+		ABIE51_RS17510	0.53	+0.1
3,825,466	+		ABIE51_RS17510	0.53	+1.3
3,825,466	-		ABIE51_RS17510	0.53	+0.3
3,825,466	-		ABIE51_RS17510	0.53	-0.3
3,825,466	-		ABIE51_RS17510	0.53	+0.2
3,825,466	-		ABIE51_RS17510	0.53	-0.3
3,825,471	+		ABIE51_RS17510	0.53	-0.6
3,825,471	+		ABIE51_RS17510	0.53	+0.3
3,825,472	-		ABIE51_RS17510	0.54	-0.4
3,825,472	-		ABIE51_RS17510	0.54	+0.3
3,825,472	-		ABIE51_RS17510	0.54	-0.5
3,825,472	-		ABIE51_RS17510	0.54	+0.2
3,825,472	-		ABIE51_RS17510	0.54	-0.4
3,825,690	+		ABIE51_RS17510	0.85	-0.6
3,825,691	-		ABIE51_RS17510	0.85	+0.6
3,825,910	-				-0.2
3,826,251	+		ABIE51_RS17515	0.19	-2.5
3,826,251	+		ABIE51_RS17515	0.19	-2.5
3,826,251	+		ABIE51_RS17515	0.19	-2.8
3,826,252	-		ABIE51_RS17515	0.19	-3.2
3,826,252	-		ABIE51_RS17515	0.19	-0.5
3,826,252	-		ABIE51_RS17515	0.19	-3.2
3,826,252	-		ABIE51_RS17515	0.19	-2.8
3,826,317	+		ABIE51_RS17515	0.22	-3.5
3,826,317	+		ABIE51_RS17515	0.22	-2.6
3,826,317	+		ABIE51_RS17515	0.22	-2.1
3,826,317	+		ABIE51_RS17515	0.22	-3.5
3,826,317	+		ABIE51_RS17515	0.22	-2.7
3,826,317	+		ABIE51_RS17515	0.22	-3.3
3,826,317	+		ABIE51_RS17515	0.22	-3.2
3,826,318	-		ABIE51_RS17515	0.22	-2.6
3,826,318	-		ABIE51_RS17515	0.22	-1.7
3,826,318	-		ABIE51_RS17515	0.22	-3.3
3,826,318	-		ABIE51_RS17515	0.22	-1.7
3,826,384	-		ABIE51_RS17515	0.26	-0.3
3,826,422	+		ABIE51_RS17515	0.28	-1.9
3,826,423	-		ABIE51_RS17515	0.28	-3.2
3,826,539	+		ABIE51_RS17515	0.34	-1.9
3,826,645	-		ABIE51_RS17515	0.40	-1.4
3,826,645	-		ABIE51_RS17515	0.40	-3.6
3,826,645	-		ABIE51_RS17515	0.40	-1.2
3,826,782	+		ABIE51_RS17515	0.47	-2.6
3,826,816	-		ABIE51_RS17515	0.49	-3.0
3,826,816	-		ABIE51_RS17515	0.49	-2.6
3,827,347	-		ABIE51_RS17515	0.77	-3.9
3,827,347	-		ABIE51_RS17515	0.77	-2.9
3,827,562	+		ABIE51_RS17515	0.89	-2.5
3,827,581	-		ABIE51_RS17515	0.90	-2.4
3,827,581	-		ABIE51_RS17515	0.90	-2.5
3,827,581	-		ABIE51_RS17515	0.90	-2.8
3,827,581	-		ABIE51_RS17515	0.90	-4.1
3,828,025	+				+0.3
3,828,025	+				+0.1
3,828,025	+				-0.7
3,828,025	+				+0.2
3,828,025	+				+0.0
3,828,025	+				-0.1
3,828,025	+				+0.3
3,828,025	+				-0.2
3,828,025	+				+1.1
3,828,025	+				+0.4
3,828,026	-				-0.0
3,828,026	-				+0.6
3,828,026	-				-0.3
3,828,026	-				-1.0
3,828,026	-				-0.4
3,828,029	+				+0.9
3,828,029	+				+0.2
3,828,029	+				+0.1
3,828,029	+				-0.2
3,828,030	-				-0.4
3,828,030	-				+0.5
3,828,030	-				-0.4
3,828,030	-				+0.2
3,828,376	+				+0.4
3,828,377	-				+0.5