Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS14530

Experiment: Ying_all64 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep B; time point 1
3,154,957	+		ABIE51_RS14525	0.41	+1.7
3,155,042	-		ABIE51_RS14525	0.48	-0.3
3,155,107	+		ABIE51_RS14525	0.54	-0.1
3,155,107	+		ABIE51_RS14525	0.54	-0.1
3,155,108	-		ABIE51_RS14525	0.54	-1.2
3,155,108	-		ABIE51_RS14525	0.54	+0.2
3,155,224	+		ABIE51_RS14525	0.63	+1.5
3,155,225	-		ABIE51_RS14525	0.63	-0.1
3,155,251	+		ABIE51_RS14525	0.66	+0.6
3,155,252	-		ABIE51_RS14525	0.66	-1.0
3,156,141	+		ABIE51_RS14530	0.37	-0.8
3,156,141	+		ABIE51_RS14530	0.37	-1.0
3,156,141	+		ABIE51_RS14530	0.37	-1.7
3,156,142	-		ABIE51_RS14530	0.37	-1.4
3,156,142	-		ABIE51_RS14530	0.37	-1.4
3,156,142	-		ABIE51_RS14530	0.37	-2.2
3,156,142	-		ABIE51_RS14530	0.37	-0.6
3,156,142	-		ABIE51_RS14530	0.37	-1.8
3,156,549	+		ABIE51_RS14530	0.80	-0.0
3,156,550	-		ABIE51_RS14530	0.80	-1.8
3,156,550	-		ABIE51_RS14530	0.80	-0.5
3,156,550	-		ABIE51_RS14530	0.80	-0.0
3,156,721	-				-1.6
3,157,015	+		ABIE51_RS14535	0.21	+1.0
3,157,015	+		ABIE51_RS14535	0.21	-0.2
3,157,016	-		ABIE51_RS14535	0.21	-0.1
3,157,016	-		ABIE51_RS14535	0.21	-1.2
3,157,016	-		ABIE51_RS14535	0.21	+0.6
3,157,016	-		ABIE51_RS14535	0.21	-0.0
3,157,016	-		ABIE51_RS14535	0.21	+0.1
3,157,016	-		ABIE51_RS14535	0.21	-0.2
3,157,016	-		ABIE51_RS14535	0.21	+0.1
3,157,063	+		ABIE51_RS14535	0.27	-0.2
3,157,063	+		ABIE51_RS14535	0.27	-0.3
3,157,063	+		ABIE51_RS14535	0.27	+1.0
3,157,064	-		ABIE51_RS14535	0.27	-0.3
3,157,064	-		ABIE51_RS14535	0.27	-0.4
3,157,064	-		ABIE51_RS14535	0.27	-0.2
3,157,064	-		ABIE51_RS14535	0.27	+0.3
3,157,064	-		ABIE51_RS14535	0.27	+0.1
3,157,064	-		ABIE51_RS14535	0.27	-1.7
3,157,064	-		ABIE51_RS14535	0.27	-0.2
3,157,064	-		ABIE51_RS14535	0.27	-0.2
3,157,064	-		ABIE51_RS14535	0.27	+0.6
3,157,111	+		ABIE51_RS14535	0.32	+0.3
3,157,111	+		ABIE51_RS14535	0.32	-0.1
3,157,112	-		ABIE51_RS14535	0.32	+0.1
3,157,112	-		ABIE51_RS14535	0.32	-0.3
3,157,246	+		ABIE51_RS14535	0.48	+0.2
3,157,246	+		ABIE51_RS14535	0.48	-0.3
3,157,246	+		ABIE51_RS14535	0.48	-0.0
3,157,246	+		ABIE51_RS14535	0.48	-0.2
3,157,247	-		ABIE51_RS14535	0.48	-0.4
3,157,247	-		ABIE51_RS14535	0.48	-0.5
3,157,247	-		ABIE51_RS14535	0.48	-0.1
3,157,261	+		ABIE51_RS14535	0.49	-0.4
3,157,261	+		ABIE51_RS14535	0.49	-0.3
3,157,261	+		ABIE51_RS14535	0.49	+0.0
3,157,261	+		ABIE51_RS14535	0.49	+0.1
3,157,262	-		ABIE51_RS14535	0.49	+1.4
3,157,318	+		ABIE51_RS14535	0.56	+0.1
3,157,318	+		ABIE51_RS14535	0.56	-0.3
3,157,319	-		ABIE51_RS14535	0.56	+1.0
3,157,319	-		ABIE51_RS14535	0.56	-0.3
3,157,319	-		ABIE51_RS14535	0.56	+0.8
3,157,324	+		ABIE51_RS14535	0.57	+0.6
3,157,324	+		ABIE51_RS14535	0.57	+0.4
3,157,325	-		ABIE51_RS14535	0.57	-0.1
3,157,462	+		ABIE51_RS14535	0.72	-0.0
3,157,463	-		ABIE51_RS14535	0.72	-0.4
3,157,463	-		ABIE51_RS14535	0.72	-0.2
3,157,463	-		ABIE51_RS14535	0.72	-0.0
3,157,679	+				+0.1
3,157,700	-				+0.3
3,157,700	-				-0.5
3,157,735	+		ABIE51_RS14540	0.11	-0.8
3,157,735	+		ABIE51_RS14540	0.11	-0.6