Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS09415

Experiment: Ying_all64 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep B; time point 1
2,029,016	+		ABIE51_RS09405	0.77	+0.5
2,029,016	+		ABIE51_RS09405	0.77	+0.6
2,029,016	+		ABIE51_RS09405	0.77	+0.7
2,029,016	+		ABIE51_RS09405	0.77	-0.1
2,029,016	+		ABIE51_RS09405	0.77	+0.0
2,029,016	+		ABIE51_RS09405	0.77	+0.9
2,029,016	+		ABIE51_RS09405	0.77	-0.4
2,029,016	+		ABIE51_RS09405	0.77	-0.4
2,029,016	+		ABIE51_RS09405	0.77	+0.6
2,029,016	+		ABIE51_RS09405	0.77	+0.5
2,029,016	+		ABIE51_RS09405	0.77	-0.3
2,029,016	+		ABIE51_RS09405	0.77	+0.4
2,029,016	+		ABIE51_RS09405	0.77	-0.8
2,029,016	+		ABIE51_RS09405	0.77	+0.3
2,029,016	+		ABIE51_RS09405	0.77	+0.3
2,029,016	+		ABIE51_RS09405	0.77	+0.1
2,029,016	+		ABIE51_RS09405	0.77	+0.8
2,029,017	-		ABIE51_RS09405	0.78	-0.3
2,029,017	-		ABIE51_RS09405	0.78	-0.0
2,029,017	-		ABIE51_RS09405	0.78	-0.3
2,029,017	-		ABIE51_RS09405	0.78	-0.4
2,029,017	-		ABIE51_RS09405	0.78	-0.1
2,029,017	-		ABIE51_RS09405	0.78	-0.2
2,029,017	-		ABIE51_RS09405	0.78	+0.0
2,029,017	-		ABIE51_RS09405	0.78	+0.9
2,029,017	-		ABIE51_RS09405	0.78	-0.3
2,029,017	-		ABIE51_RS09405	0.78	-0.6
2,029,017	-		ABIE51_RS09405	0.78	+0.3
2,029,017	-		ABIE51_RS09405	0.78	-0.3
2,029,017	-		ABIE51_RS09405	0.78	-1.0
2,029,017	-		ABIE51_RS09405	0.78	-0.0
2,029,017	-		ABIE51_RS09405	0.78	-0.3
2,029,017	-		ABIE51_RS09405	0.78	+0.1
2,029,017	-		ABIE51_RS09405	0.78	+0.2
2,029,017	-		ABIE51_RS09405	0.78	+0.4
2,029,159	+				+0.3
2,029,159	+				+0.6
2,029,159	+				-0.0
2,029,159	+				+0.2
2,029,159	+				+0.2
2,029,159	+				-0.3
2,029,160	-				+0.0
2,029,160	-				+0.2
2,029,160	-				+1.0
2,029,160	-				+0.0
2,029,211	+				+0.2
2,029,211	+				+0.2
2,029,212	-				+0.2
2,029,212	-				-0.9
2,029,212	-				+0.6
2,029,212	-				-0.4
2,029,212	-				-0.7
2,029,291	+				-0.2
2,029,292	-				-0.3
2,029,298	-				-0.1
2,029,315	+				+0.8
2,029,316	-				+0.1
2,029,330	-				-0.7
2,029,825	+				+0.2
2,029,825	+				+1.4
2,029,825	+				+0.2
2,029,825	+				+0.2
2,029,825	+				+1.1
2,029,825	+				+0.3
2,029,826	-				-0.7
2,029,826	-				-0.3
2,029,826	-				-1.3
2,029,826	-				-0.4
2,029,826	-				-2.3
2,029,826	-				-0.9
2,029,826	-				+0.3
2,029,826	-				-0.1
2,029,826	-				-1.4
2,030,077	+				-1.3
2,030,077	+				-0.3
2,030,077	+				-0.7
2,030,077	+				-0.3
2,030,078	-				-1.1
2,030,078	-				-1.3
2,030,078	-				-1.5
2,030,078	-				-1.0
2,030,078	-				-1.7
2,030,245	+		ABIE51_RS09415	0.24	-0.0
2,030,245	+		ABIE51_RS09415	0.24	-0.6
2,030,245	+		ABIE51_RS09415	0.24	-1.4
2,030,245	+		ABIE51_RS09415	0.24	-0.8
2,030,245	+		ABIE51_RS09415	0.24	-0.8
2,030,245	+		ABIE51_RS09415	0.24	-1.4
2,030,245	+		ABIE51_RS09415	0.24	-1.5
2,030,245	+		ABIE51_RS09415	0.24	-0.6
2,030,245	+		ABIE51_RS09415	0.24	-1.6
2,030,245	+		ABIE51_RS09415	0.24	-1.0
2,030,245	+		ABIE51_RS09415	0.24	-2.1
2,030,245	+		ABIE51_RS09415	0.24	-0.9
2,030,245	+		ABIE51_RS09415	0.24	-0.3
2,030,245	+		ABIE51_RS09415	0.24	-2.1
2,030,245	+		ABIE51_RS09415	0.24	-0.8
2,030,245	+		ABIE51_RS09415	0.24	-0.8
2,030,245	+		ABIE51_RS09415	0.24	-1.0
2,030,245	+		ABIE51_RS09415	0.24	-1.1
2,030,245	+		ABIE51_RS09415	0.24	-1.5
2,030,246	-		ABIE51_RS09415	0.24	-1.6
2,030,246	-		ABIE51_RS09415	0.24	-0.9
2,030,246	-		ABIE51_RS09415	0.24	-1.3
2,030,246	-		ABIE51_RS09415	0.24	-2.1
2,030,246	-		ABIE51_RS09415	0.24	-0.9
2,030,246	-		ABIE51_RS09415	0.24	-0.5
2,030,246	-		ABIE51_RS09415	0.24	-2.9
2,030,246	-		ABIE51_RS09415	0.24	-2.0
2,030,246	-		ABIE51_RS09415	0.24	-2.2
2,030,246	-		ABIE51_RS09415	0.24	-1.5
2,030,246	-		ABIE51_RS09415	0.24	-1.1
2,030,246	-		ABIE51_RS09415	0.24	-0.8
2,030,246	-		ABIE51_RS09415	0.24	-0.4
2,030,246	-		ABIE51_RS09415	0.24	-1.5
2,030,246	-		ABIE51_RS09415	0.24	-0.9
2,030,246	-		ABIE51_RS09415	0.24	-0.6
2,030,246	-		ABIE51_RS09415	0.24	-1.2
2,030,246	-		ABIE51_RS09415	0.24	+0.1
2,030,246	-		ABIE51_RS09415	0.24	-1.0
2,030,246	-		ABIE51_RS09415	0.24	-1.6
2,030,246	-		ABIE51_RS09415	0.24	-0.8
2,030,246	-		ABIE51_RS09415	0.24	-1.1
2,030,246	-		ABIE51_RS09415	0.24	-2.2
2,030,246	-		ABIE51_RS09415	0.24	-1.8
2,030,246	-		ABIE51_RS09415	0.24	-2.2
2,030,246	-		ABIE51_RS09415	0.24	-1.6
2,030,246	-		ABIE51_RS09415	0.24	-1.9
2,030,246	-		ABIE51_RS09415	0.24	-1.2
2,030,521	+		ABIE51_RS09415	0.49	-1.1
2,030,522	-		ABIE51_RS09415	0.49	+0.1
2,030,674	+		ABIE51_RS09415	0.62	-0.5
2,030,674	+		ABIE51_RS09415	0.62	-0.0
2,030,674	+		ABIE51_RS09415	0.62	-0.7
2,030,674	+		ABIE51_RS09415	0.62	-0.6
2,030,674	+		ABIE51_RS09415	0.62	-0.2
2,030,674	+		ABIE51_RS09415	0.62	-0.7
2,030,674	+		ABIE51_RS09415	0.62	-1.3
2,030,674	+		ABIE51_RS09415	0.62	-0.1
2,030,675	-		ABIE51_RS09415	0.62	-0.6
2,030,675	-		ABIE51_RS09415	0.62	-2.0
2,030,675	-		ABIE51_RS09415	0.62	-1.8
2,030,675	-		ABIE51_RS09415	0.62	-0.5
2,030,675	-		ABIE51_RS09415	0.62	-1.7
2,030,675	-		ABIE51_RS09415	0.62	-2.0
2,030,675	-		ABIE51_RS09415	0.62	-0.7
2,030,675	-		ABIE51_RS09415	0.62	-0.3
2,030,675	-		ABIE51_RS09415	0.62	-2.0
2,030,675	-		ABIE51_RS09415	0.62	-1.5
2,030,675	-		ABIE51_RS09415	0.62	-0.1
2,030,675	-		ABIE51_RS09415	0.62	-1.2
2,030,675	-		ABIE51_RS09415	0.62	-1.3
2,030,675	-		ABIE51_RS09415	0.62	-0.4
2,030,675	-		ABIE51_RS09415	0.62	-0.9
2,030,675	-		ABIE51_RS09415	0.62	-0.9
2,030,675	-		ABIE51_RS09415	0.62	-1.4
2,030,675	-		ABIE51_RS09415	0.62	-2.0
2,030,710	+		ABIE51_RS09415	0.66	-1.0
2,030,710	+		ABIE51_RS09415	0.66	+0.3
2,030,711	-		ABIE51_RS09415	0.66	-1.3
2,030,749	+		ABIE51_RS09415	0.69	-1.7
2,030,749	+		ABIE51_RS09415	0.69	-0.5
2,030,749	+		ABIE51_RS09415	0.69	-1.3
2,030,749	+		ABIE51_RS09415	0.69	-0.7
2,030,749	+		ABIE51_RS09415	0.69	-0.5
2,030,750	-		ABIE51_RS09415	0.69	-1.7
2,030,750	-		ABIE51_RS09415	0.69	+0.1
2,030,887	-		ABIE51_RS09415	0.81	-0.4
2,031,115	-				-1.3
2,031,115	-				+0.6
2,031,349	+		ABIE51_RS09420	0.28	-0.3
2,031,349	+		ABIE51_RS09420	0.28	+0.8
2,031,350	-		ABIE51_RS09420	0.28	-1.9
2,031,350	-		ABIE51_RS09420	0.28	-0.4
2,031,350	-		ABIE51_RS09420	0.28	-0.1
2,031,350	-		ABIE51_RS09420	0.28	-0.8
2,031,450	+		ABIE51_RS09420	0.40	-0.2
2,031,472	+		ABIE51_RS09420	0.42	-0.7
2,031,472	+		ABIE51_RS09420	0.42	+0.8
2,031,472	+		ABIE51_RS09420	0.42	+0.1
2,031,472	+		ABIE51_RS09420	0.42	-0.5
2,031,472	+		ABIE51_RS09420	0.42	+0.9
2,031,473	-		ABIE51_RS09420	0.42	-1.4
2,031,473	-		ABIE51_RS09420	0.42	-1.3
2,031,473	-		ABIE51_RS09420	0.42	-0.7
2,031,473	-		ABIE51_RS09420	0.42	-0.9
2,031,473	-		ABIE51_RS09420	0.42	-1.7
2,031,473	-		ABIE51_RS09420	0.42	-1.3
2,031,473	-		ABIE51_RS09420	0.42	-1.7
2,031,473	-		ABIE51_RS09420	0.42	-1.1
2,031,473	-		ABIE51_RS09420	0.42	-1.8
2,031,473	-		ABIE51_RS09420	0.42	-0.8
2,031,473	-		ABIE51_RS09420	0.42	-1.4
2,031,473	-		ABIE51_RS09420	0.42	-1.2
2,031,523	+		ABIE51_RS09420	0.48	+0.5
2,031,523	+		ABIE51_RS09420	0.48	+0.1
2,031,523	+		ABIE51_RS09420	0.48	+0.4
2,031,523	+		ABIE51_RS09420	0.48	-0.7
2,031,523	+		ABIE51_RS09420	0.48	-0.1
2,031,523	+		ABIE51_RS09420	0.48	-0.3
2,031,523	+		ABIE51_RS09420	0.48	+0.3
2,031,523	+		ABIE51_RS09420	0.48	+0.9
2,031,523	+		ABIE51_RS09420	0.48	+0.1
2,031,524	-		ABIE51_RS09420	0.49	-0.7
2,031,524	-		ABIE51_RS09420	0.49	-0.8
2,031,524	-		ABIE51_RS09420	0.49	-0.7
2,031,524	-		ABIE51_RS09420	0.49	-1.0
2,031,524	-		ABIE51_RS09420	0.49	-1.2
2,031,524	-		ABIE51_RS09420	0.49	-0.8
2,031,524	-		ABIE51_RS09420	0.49	-0.9
2,031,524	-		ABIE51_RS09420	0.49	-1.4
2,031,524	-		ABIE51_RS09420	0.49	-0.8
2,031,524	-		ABIE51_RS09420	0.49	-1.2
2,031,524	-		ABIE51_RS09420	0.49	-0.7
2,031,524	-		ABIE51_RS09420	0.49	-1.2
2,031,524	-		ABIE51_RS09420	0.49	-1.4
2,031,524	-		ABIE51_RS09420	0.49	-1.1
2,031,524	-		ABIE51_RS09420	0.49	-2.3
2,031,524	-		ABIE51_RS09420	0.49	-0.6
2,031,524	-		ABIE51_RS09420	0.49	-0.6
2,031,524	-		ABIE51_RS09420	0.49	-0.9
2,031,524	-		ABIE51_RS09420	0.49	+0.0
2,031,524	-		ABIE51_RS09420	0.49	-1.3
2,031,601	+		ABIE51_RS09420	0.58	+0.3
2,031,601	+		ABIE51_RS09420	0.58	+0.1
2,031,601	+		ABIE51_RS09420	0.58	-0.3
2,031,601	+		ABIE51_RS09420	0.58	-1.1
2,031,601	+		ABIE51_RS09420	0.58	+0.0
2,031,601	+		ABIE51_RS09420	0.58	-0.9
2,031,601	+		ABIE51_RS09420	0.58	-0.6
2,031,602	-		ABIE51_RS09420	0.58	-0.0
2,031,602	-		ABIE51_RS09420	0.58	-0.0
2,031,602	-		ABIE51_RS09420	0.58	-1.6
2,031,602	-		ABIE51_RS09420	0.58	-0.7
2,031,602	-		ABIE51_RS09420	0.58	-1.3
2,031,602	-		ABIE51_RS09420	0.58	-1.4
2,031,602	-		ABIE51_RS09420	0.58	-1.4
2,031,602	-		ABIE51_RS09420	0.58	-1.7
2,031,602	-		ABIE51_RS09420	0.58	-1.8
2,031,602	-		ABIE51_RS09420	0.58	-1.0
2,031,758	+		ABIE51_RS09420	0.76	+0.4
2,031,883	+				+0.6
2,031,883	+				+1.7
2,031,883	+				-0.2
2,031,883	+				+0.3
2,031,883	+				+0.0
2,031,883	+				+0.7
2,031,883	+				+0.4
2,031,883	+				+0.7
2,031,884	-				-1.5
2,031,884	-				-0.9
2,031,884	-				+0.4
2,031,884	-				-1.8
2,031,884	-				-1.7
2,031,884	-				+0.1