Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS09370

Experiment: Ying_all64 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep B; time point 1
2,018,638	-				-0.7
2,018,638	-				-1.6
2,018,926	-		ABIE51_RS09365	0.36	-0.9
2,018,926	-		ABIE51_RS09365	0.36	+0.3
2,019,242	-		ABIE51_RS09365	0.69	-0.9
2,019,242	-		ABIE51_RS09365	0.69	-2.4
2,019,242	-		ABIE51_RS09365	0.69	-0.1
2,019,242	-		ABIE51_RS09365	0.69	-2.1
2,019,242	-		ABIE51_RS09365	0.69	-0.7
2,019,391	-		ABIE51_RS09365	0.84	-0.4
2,019,391	-		ABIE51_RS09365	0.84	-2.8
2,019,391	-		ABIE51_RS09365	0.84	+0.3
2,019,391	-		ABIE51_RS09365	0.84	-1.3
2,019,416	-		ABIE51_RS09365	0.87	-0.9
2,019,416	-		ABIE51_RS09365	0.87	-0.9
2,019,416	-		ABIE51_RS09365	0.87	-2.3
2,019,469	+				-2.2
2,019,469	+				-0.7
2,019,469	+				-3.2
2,019,480	+				-0.6
2,019,480	+				-1.2
2,019,480	+				-0.5
2,019,480	+				-0.9
2,019,480	+				-1.6
2,019,480	+				-0.7
2,019,480	+				-0.3
2,019,480	+				-0.3
2,019,480	+				-1.1
2,019,481	-				-2.1
2,019,481	-				-1.2
2,019,481	-				-0.4
2,019,481	-				-2.5
2,019,481	-				-1.1
2,019,482	+				-1.3
2,019,483	-				-1.9
2,019,483	-				-2.4
2,019,483	-				+0.3
2,019,483	-				-2.3
2,019,483	-				-0.1
2,019,483	-				-2.6
2,019,483	-				-3.2
2,019,483	-				-2.8
2,019,548	+				+0.5
2,019,548	+				-0.2
2,019,548	+				-0.3
2,019,548	+				+1.2
2,019,548	+				+0.4
2,019,549	-				+0.5
2,019,549	-				+0.7
2,019,549	-				+0.1
2,019,549	-				+0.9
2,019,570	+				+0.1
2,019,570	+				+0.1
2,019,571	-				+0.1
2,019,571	-				+0.0
2,019,793	-		ABIE51_RS09370	0.11	-1.1
2,019,891	+		ABIE51_RS09370	0.16	-0.6
2,019,891	+		ABIE51_RS09370	0.16	-1.6
2,019,892	-		ABIE51_RS09370	0.16	-2.0
2,019,892	-		ABIE51_RS09370	0.16	-1.5
2,019,933	+		ABIE51_RS09370	0.18	-0.2
2,019,933	+		ABIE51_RS09370	0.18	-0.5
2,020,098	+		ABIE51_RS09370	0.27	+0.0
2,020,098	+		ABIE51_RS09370	0.27	-1.4
2,020,098	+		ABIE51_RS09370	0.27	-1.6
2,020,099	-		ABIE51_RS09370	0.27	-1.9
2,020,099	-		ABIE51_RS09370	0.27	-2.2
2,020,099	-		ABIE51_RS09370	0.27	-3.0
2,020,099	-		ABIE51_RS09370	0.27	-2.1
2,020,250	+		ABIE51_RS09370	0.35	-1.7
2,020,366	+		ABIE51_RS09370	0.41	-0.1
2,020,599	+		ABIE51_RS09370	0.53	-3.9
2,020,599	+		ABIE51_RS09370	0.53	-3.0
2,020,599	+		ABIE51_RS09370	0.53	-1.1
2,020,599	+		ABIE51_RS09370	0.53	-2.8
2,020,599	+		ABIE51_RS09370	0.53	-4.8
2,020,599	+		ABIE51_RS09370	0.53	-2.1
2,020,599	+		ABIE51_RS09370	0.53	-2.6
2,020,599	+		ABIE51_RS09370	0.53	-4.0
2,020,599	+		ABIE51_RS09370	0.53	-2.3
2,020,599	+		ABIE51_RS09370	0.53	-2.3
2,020,599	+		ABIE51_RS09370	0.53	+0.3
2,020,599	+		ABIE51_RS09370	0.53	-3.4
2,020,599	+		ABIE51_RS09370	0.53	-1.8
2,020,600	-		ABIE51_RS09370	0.53	-3.0
2,020,600	-		ABIE51_RS09370	0.53	-2.9
2,020,600	-		ABIE51_RS09370	0.53	-0.7
2,020,600	-		ABIE51_RS09370	0.53	-1.5
2,020,600	-		ABIE51_RS09370	0.53	-2.7
2,020,600	-		ABIE51_RS09370	0.53	-2.4
2,020,600	-		ABIE51_RS09370	0.53	-2.6
2,020,600	-		ABIE51_RS09370	0.53	-0.9
2,020,600	-		ABIE51_RS09370	0.53	-3.1
2,020,600	-		ABIE51_RS09370	0.53	-3.3
2,020,600	-		ABIE51_RS09370	0.53	-0.4
2,020,692	+		ABIE51_RS09370	0.58	-3.1
2,020,693	-		ABIE51_RS09370	0.58	-2.2
2,020,693	-		ABIE51_RS09370	0.58	-3.9
2,020,693	-		ABIE51_RS09370	0.58	-2.5
2,021,100	+		ABIE51_RS09370	0.79	-2.4
2,021,100	+		ABIE51_RS09370	0.79	-2.6
2,021,100	+		ABIE51_RS09370	0.79	-2.3
2,021,100	+		ABIE51_RS09370	0.79	-2.6
2,021,101	-		ABIE51_RS09370	0.79	-2.6
2,021,199	+		ABIE51_RS09370	0.84	-3.2
2,021,200	-		ABIE51_RS09370	0.85	-1.4
2,021,200	-		ABIE51_RS09370	0.85	-4.0
2,021,364	+				-3.6
2,021,364	+				-2.1
2,021,365	-				-1.2
2,021,365	-				-2.4
2,021,365	-				-3.1
2,021,426	+				-0.8
2,021,426	+				-2.2
2,021,426	+				-3.0
2,021,427	-				+1.3
2,021,427	-				-0.6
2,021,427	-				-1.5
2,021,440	-				-0.5
2,021,615	+		ABIE51_RS09375	0.13	-1.1
2,021,615	+		ABIE51_RS09375	0.13	-0.7
2,021,615	+		ABIE51_RS09375	0.13	-1.1
2,021,616	-		ABIE51_RS09375	0.13	-2.1
2,021,616	-		ABIE51_RS09375	0.13	-1.4
2,021,616	-		ABIE51_RS09375	0.13	-0.8
2,021,675	+		ABIE51_RS09375	0.20	-2.0
2,021,675	+		ABIE51_RS09375	0.20	-4.0
2,021,697	-		ABIE51_RS09375	0.22	-0.8
2,021,711	+		ABIE51_RS09375	0.24	-1.4
2,021,711	+		ABIE51_RS09375	0.24	-3.5
2,021,711	+		ABIE51_RS09375	0.24	-2.2
2,021,711	+		ABIE51_RS09375	0.24	-0.7
2,021,712	-		ABIE51_RS09375	0.24	-0.9
2,021,712	-		ABIE51_RS09375	0.24	-2.2
2,021,712	-		ABIE51_RS09375	0.24	-0.1
2,021,712	-		ABIE51_RS09375	0.24	-2.1
2,022,011	+		ABIE51_RS09375	0.57	-4.2
2,022,111	+		ABIE51_RS09375	0.68	-0.1
2,022,112	-		ABIE51_RS09375	0.69	-1.7
2,022,122	+		ABIE51_RS09375	0.70	-0.4
2,022,122	+		ABIE51_RS09375	0.70	-1.6
2,022,123	-		ABIE51_RS09375	0.70	-2.5
2,022,123	-		ABIE51_RS09375	0.70	-3.9
2,022,123	-		ABIE51_RS09375	0.70	-1.3
2,022,123	-		ABIE51_RS09375	0.70	-3.6
2,022,123	-		ABIE51_RS09375	0.70	-1.4
2,022,123	-		ABIE51_RS09375	0.70	+0.3
2,022,123	-		ABIE51_RS09375	0.70	-2.8
2,022,123	-		ABIE51_RS09375	0.70	-2.0
2,022,123	-		ABIE51_RS09375	0.70	-2.9
2,022,123	-		ABIE51_RS09375	0.70	-2.9
2,022,239	+		ABIE51_RS09375	0.83	-3.2
2,022,239	+		ABIE51_RS09375	0.83	-3.5
2,022,271	+		ABIE51_RS09375	0.86	-2.4
2,022,450	+				+0.2
2,022,450	+				-0.2
2,022,450	+				+0.2
2,022,450	+				-0.3
2,022,450	+				-0.3
2,022,450	+				-0.0
2,022,451	-				-0.1
2,022,451	-				+0.3
2,022,451	-				+0.2
2,022,451	-				-0.1
2,022,451	-				-0.1
2,022,451	-				-0.5
2,022,451	-				+0.5
2,022,451	-				-0.0
2,022,451	-				-0.1
2,022,451	-				+0.3
2,022,451	-				+0.3
2,022,451	-				+0.1
2,022,451	-				-0.1