Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS08520

Experiment: Ying_all64 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep B; time point 1
1,818,857	+				+0.2
1,818,858	-				+0.1
1,818,858	-				-0.0
1,818,858	-				-0.3
1,819,748	-				+0.0
1,819,748	-				+1.5
1,819,748	-				+0.2
1,819,839	+		ABIE51_RS08520	0.14	+0.6
1,820,108	-		ABIE51_RS08520	0.54	-1.0
1,820,422	+				-0.0
1,820,422	+				+0.2
1,820,422	+				+0.3
1,820,422	+				+0.2
1,820,423	-				+0.1
1,820,423	-				-0.4
1,820,423	-				+0.0
1,820,456	-				-0.4
1,820,456	-				+0.2
1,820,463	+				+0.2
1,820,463	+				-0.3
1,820,463	+				-0.3
1,820,463	+				+0.0
1,820,463	+				-0.2
1,820,463	+				-0.4
1,820,464	-				-0.9
1,820,464	-				+0.1
1,820,490	+				+0.0
1,820,490	+				-0.1
1,820,491	-				+0.3
1,820,491	-				+0.2
1,820,491	-				-0.1
1,820,491	-				-0.0
1,820,491	-				+0.8
1,820,491	-				+0.2
1,820,794	-		ABIE51_RS08525	0.16	+0.6
1,820,794	-		ABIE51_RS08525	0.16	-0.3
1,820,794	-		ABIE51_RS08525	0.16	-0.1
1,820,805	+		ABIE51_RS08525	0.17	-1.0
1,820,805	+		ABIE51_RS08525	0.17	+0.7
1,820,805	+		ABIE51_RS08525	0.17	-1.2
1,820,964	+		ABIE51_RS08525	0.26	+0.1
1,820,964	+		ABIE51_RS08525	0.26	+0.1
1,820,965	-		ABIE51_RS08525	0.26	+1.0
1,821,021	+		ABIE51_RS08525	0.29	+0.5
1,821,021	+		ABIE51_RS08525	0.29	+0.8
1,821,022	-		ABIE51_RS08525	0.29	+0.3
1,821,022	-		ABIE51_RS08525	0.29	+0.2
1,821,048	+		ABIE51_RS08525	0.30	+0.5
1,821,049	-		ABIE51_RS08525	0.30	+0.1
1,821,049	-		ABIE51_RS08525	0.30	-0.9
1,821,393	+		ABIE51_RS08525	0.49	-0.1
1,821,393	+		ABIE51_RS08525	0.49	-0.3
1,821,393	+		ABIE51_RS08525	0.49	+0.2
1,821,394	-		ABIE51_RS08525	0.49	+0.0
1,821,394	-		ABIE51_RS08525	0.49	+0.5
1,821,394	-		ABIE51_RS08525	0.49	-0.2
1,821,394	-		ABIE51_RS08525	0.49	-0.4
1,821,394	-		ABIE51_RS08525	0.49	-0.2