Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS06340

Experiment: Ying_all64 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep B; time point 1
1,353,916	-		ABIE51_RS06335	0.60	+0.2
1,353,997	-		ABIE51_RS06335	0.65	-0.0
1,353,997	-		ABIE51_RS06335	0.65	-0.9
1,354,033	-		ABIE51_RS06335	0.67	+0.2
1,354,188	+		ABIE51_RS06335	0.75	+0.1
1,354,242	+		ABIE51_RS06335	0.78	+0.2
1,354,242	+		ABIE51_RS06335	0.78	-0.9
1,354,242	+		ABIE51_RS06335	0.78	+0.2
1,354,242	+		ABIE51_RS06335	0.78	+0.2
1,354,243	-		ABIE51_RS06335	0.78	-0.1
1,354,243	-		ABIE51_RS06335	0.78	+0.5
1,354,243	-		ABIE51_RS06335	0.78	+0.0
1,354,254	+		ABIE51_RS06335	0.79	+0.3
1,354,255	-		ABIE51_RS06335	0.79	-0.2
1,354,437	+		ABIE51_RS06335	0.89	+0.3
1,354,438	-		ABIE51_RS06335	0.90	-0.0
1,354,699	+				+0.7
1,354,700	-				+0.4
1,354,700	-				+0.7
1,354,700	-				+0.1
1,354,700	-				+0.3
1,354,700	-				+0.2
1,355,064	+		ABIE51_RS06340	0.25	-4.1
1,355,167	-		ABIE51_RS06340	0.34	-4.1
1,355,167	-		ABIE51_RS06340	0.34	-3.2
1,355,167	-		ABIE51_RS06340	0.34	-4.9
1,355,307	+		ABIE51_RS06340	0.46	-4.2
1,355,308	-		ABIE51_RS06340	0.46	-2.1
1,355,493	+		ABIE51_RS06340	0.62	-3.9
1,355,494	-		ABIE51_RS06340	0.62	-2.1
1,355,511	+		ABIE51_RS06340	0.64	-1.4
1,355,511	+		ABIE51_RS06340	0.64	-1.6
1,355,511	+		ABIE51_RS06340	0.64	-2.0
1,355,610	+		ABIE51_RS06340	0.72	-3.6
1,355,610	+		ABIE51_RS06340	0.72	-3.1
1,355,611	-		ABIE51_RS06340	0.72	-4.3
1,355,930	+				+0.2
1,355,930	+				-0.4
1,355,930	+				-1.3
1,355,931	-				-0.5
1,355,931	-				-2.1
1,356,284	-				-0.3
1,356,310	-				+0.1
1,356,314	+				+0.5
1,356,315	-				-0.1
1,356,315	-				+0.1
1,356,324	+				+0.1
1,356,558	+		ABIE51_RS06345	0.14	+0.1
1,356,681	+		ABIE51_RS06345	0.21	-0.5
1,356,681	+		ABIE51_RS06345	0.21	+0.3
1,356,681	+		ABIE51_RS06345	0.21	+0.2
1,356,699	+		ABIE51_RS06345	0.22	-0.1
1,356,699	+		ABIE51_RS06345	0.22	+0.9
1,356,699	+		ABIE51_RS06345	0.22	-0.4
1,356,699	+		ABIE51_RS06345	0.22	-1.1
1,356,742	-		ABIE51_RS06345	0.24	-0.0
1,356,742	-		ABIE51_RS06345	0.24	-0.1