Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS09735

Experiment: Ying_all64 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 1
2,101,693	+		ABIE51_RS09730	0.69	-0.8
2,101,694	-		ABIE51_RS09730	0.69	-0.1
2,101,694	-		ABIE51_RS09730	0.69	+0.0
2,101,888	+		ABIE51_RS09730	0.78	-0.6
2,101,888	+		ABIE51_RS09730	0.78	-0.3
2,101,888	+		ABIE51_RS09730	0.78	-0.0
2,101,889	-		ABIE51_RS09730	0.78	-0.6
2,101,889	-		ABIE51_RS09730	0.78	+1.5
2,101,889	-		ABIE51_RS09730	0.78	-0.2
2,102,092	+		ABIE51_RS09730	0.87	+0.4
2,102,093	-		ABIE51_RS09730	0.87	-0.1
2,102,195	+				+0.1
2,102,396	+				+0.5
2,102,396	+				-0.3
2,102,479	-				+0.1
2,102,479	-				+0.2
2,102,479	-				+0.2
2,102,497	+				-0.1
2,102,497	+				+0.0
2,102,497	+				+0.4
2,102,498	-				-0.0
2,102,498	-				-0.9
2,102,498	-				-0.9
2,102,604	+		ABIE51_RS09735	0.14	+0.1
2,102,604	+		ABIE51_RS09735	0.14	+0.0
2,102,604	+		ABIE51_RS09735	0.14	-0.2
2,102,605	-		ABIE51_RS09735	0.14	+0.3
2,102,605	-		ABIE51_RS09735	0.14	-0.2
2,102,605	-		ABIE51_RS09735	0.14	-0.2
2,102,731	-		ABIE51_RS09735	0.24	+0.1
2,102,796	+		ABIE51_RS09735	0.30	-0.3
2,102,796	+		ABIE51_RS09735	0.30	-0.7
2,102,796	+		ABIE51_RS09735	0.30	+0.7
2,102,797	-		ABIE51_RS09735	0.30	-1.7
2,102,797	-		ABIE51_RS09735	0.30	-0.3
2,102,854	-		ABIE51_RS09735	0.34	-0.3
2,103,174	+		ABIE51_RS09735	0.61	-0.5
2,103,175	-		ABIE51_RS09735	0.61	+0.4
2,103,175	-		ABIE51_RS09735	0.61	-0.7
2,103,175	-		ABIE51_RS09735	0.61	-0.3
2,103,312	+		ABIE51_RS09735	0.72	-0.6
2,103,312	+		ABIE51_RS09735	0.72	+0.3
2,103,731	+				+0.2
2,103,893	+				-0.6
2,103,954	-				+0.8
2,104,142	+		ABIE51_RS09740	0.15	-0.3
2,104,143	-		ABIE51_RS09740	0.15	+0.1
2,104,143	-		ABIE51_RS09740	0.15	-0.3
2,104,321	+		ABIE51_RS09740	0.28	+0.1
2,104,456	+		ABIE51_RS09740	0.37	+0.6
2,104,456	+		ABIE51_RS09740	0.37	-1.5
2,104,456	+		ABIE51_RS09740	0.37	+0.2
2,104,457	-		ABIE51_RS09740	0.37	-0.3