Experiment: diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day2
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HMPREF1078_RS00910 and HMPREF1078_RS00915 are separated by 3 nucleotides HMPREF1078_RS00915 and HMPREF1078_RS00925 are separated by 481 nucleotides
HMPREF1078_RS00910: HMPREF1078_RS00910 - GH92 family glycosyl hydrolase, at 221,959 to 224,268
_RS00910
HMPREF1078_RS00915: HMPREF1078_RS00915 - GH92 family glycosyl hydrolase, at 224,272 to 226,572
_RS00915
HMPREF1078_RS00925: HMPREF1078_RS00925 - UpxY family transcription antiterminator, at 227,054 to 227,566
_RS00925
Position (kb) 224
225
226
227 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3 at 223.274 kb on + strand, within HMPREF1078_RS00910 at 223.274 kb on + strand, within HMPREF1078_RS00910 at 223.304 kb on + strand, within HMPREF1078_RS00910 at 223.315 kb on + strand, within HMPREF1078_RS00910 at 223.315 kb on + strand, within HMPREF1078_RS00910 at 223.315 kb on + strand, within HMPREF1078_RS00910 at 223.315 kb on + strand, within HMPREF1078_RS00910 at 223.316 kb on - strand, within HMPREF1078_RS00910 at 223.318 kb on + strand, within HMPREF1078_RS00910 at 223.333 kb on + strand, within HMPREF1078_RS00910 at 223.333 kb on + strand, within HMPREF1078_RS00910 at 223.349 kb on + strand, within HMPREF1078_RS00910 at 223.374 kb on + strand, within HMPREF1078_RS00910 at 223.375 kb on - strand, within HMPREF1078_RS00910 at 223.384 kb on + strand, within HMPREF1078_RS00910 at 223.384 kb on + strand, within HMPREF1078_RS00910 at 223.385 kb on - strand, within HMPREF1078_RS00910 at 223.385 kb on - strand, within HMPREF1078_RS00910 at 223.385 kb on - strand, within HMPREF1078_RS00910 at 223.390 kb on + strand, within HMPREF1078_RS00910 at 223.391 kb on - strand, within HMPREF1078_RS00910 at 223.391 kb on - strand, within HMPREF1078_RS00910 at 223.392 kb on + strand, within HMPREF1078_RS00910 at 223.392 kb on + strand, within HMPREF1078_RS00910 at 223.393 kb on - strand, within HMPREF1078_RS00910 at 223.393 kb on - strand, within HMPREF1078_RS00910 at 223.404 kb on + strand, within HMPREF1078_RS00910 at 223.405 kb on - strand, within HMPREF1078_RS00910 at 223.405 kb on - strand, within HMPREF1078_RS00910 at 223.405 kb on - strand, within HMPREF1078_RS00910 at 223.456 kb on + strand, within HMPREF1078_RS00910 at 223.457 kb on - strand, within HMPREF1078_RS00910 at 223.477 kb on + strand, within HMPREF1078_RS00910 at 223.479 kb on + strand, within HMPREF1078_RS00910 at 223.494 kb on + strand, within HMPREF1078_RS00910 at 223.524 kb on + strand, within HMPREF1078_RS00910 at 223.525 kb on - strand, within HMPREF1078_RS00910 at 223.578 kb on + strand, within HMPREF1078_RS00910 at 223.590 kb on + strand, within HMPREF1078_RS00910 at 223.601 kb on - strand, within HMPREF1078_RS00910 at 223.602 kb on + strand, within HMPREF1078_RS00910 at 223.602 kb on + strand, within HMPREF1078_RS00910 at 223.602 kb on + strand, within HMPREF1078_RS00910 at 223.603 kb on - strand, within HMPREF1078_RS00910 at 223.603 kb on - strand, within HMPREF1078_RS00910 at 223.603 kb on - strand, within HMPREF1078_RS00910 at 223.603 kb on - strand, within HMPREF1078_RS00910 at 223.671 kb on + strand, within HMPREF1078_RS00910 at 223.671 kb on + strand, within HMPREF1078_RS00910 at 223.672 kb on - strand, within HMPREF1078_RS00910 at 223.672 kb on - strand, within HMPREF1078_RS00910 at 223.685 kb on + strand, within HMPREF1078_RS00910 at 223.713 kb on + strand, within HMPREF1078_RS00910 at 223.714 kb on - strand, within HMPREF1078_RS00910 at 223.714 kb on - strand, within HMPREF1078_RS00910 at 223.717 kb on + strand, within HMPREF1078_RS00910 at 223.717 kb on + strand, within HMPREF1078_RS00910 at 223.718 kb on - strand, within HMPREF1078_RS00910 at 223.718 kb on - strand, within HMPREF1078_RS00910 at 223.718 kb on - strand, within HMPREF1078_RS00910 at 223.758 kb on + strand, within HMPREF1078_RS00910 at 223.774 kb on + strand, within HMPREF1078_RS00910 at 223.774 kb on + strand, within HMPREF1078_RS00910 at 223.774 kb on + strand, within HMPREF1078_RS00910 at 223.774 kb on + strand, within HMPREF1078_RS00910 at 223.775 kb on - strand, within HMPREF1078_RS00910 at 223.775 kb on - strand, within HMPREF1078_RS00910 at 223.775 kb on - strand, within HMPREF1078_RS00910 at 223.775 kb on - strand, within HMPREF1078_RS00910 at 223.803 kb on + strand, within HMPREF1078_RS00910 at 223.803 kb on + strand, within HMPREF1078_RS00910 at 223.804 kb on - strand, within HMPREF1078_RS00910 at 223.811 kb on - strand, within HMPREF1078_RS00910 at 223.822 kb on + strand, within HMPREF1078_RS00910 at 223.822 kb on + strand, within HMPREF1078_RS00910 at 223.823 kb on - strand, within HMPREF1078_RS00910 at 223.823 kb on - strand, within HMPREF1078_RS00910 at 223.850 kb on - strand, within HMPREF1078_RS00910 at 223.850 kb on - strand, within HMPREF1078_RS00910 at 223.875 kb on + strand, within HMPREF1078_RS00910 at 223.876 kb on - strand, within HMPREF1078_RS00910 at 223.876 kb on - strand, within HMPREF1078_RS00910 at 223.876 kb on - strand, within HMPREF1078_RS00910 at 223.879 kb on + strand, within HMPREF1078_RS00910 at 223.879 kb on + strand, within HMPREF1078_RS00910 at 223.880 kb on - strand, within HMPREF1078_RS00910 at 223.901 kb on - strand, within HMPREF1078_RS00910 at 223.918 kb on - strand, within HMPREF1078_RS00910 at 223.939 kb on + strand, within HMPREF1078_RS00910 at 223.943 kb on + strand, within HMPREF1078_RS00910 at 223.943 kb on + strand, within HMPREF1078_RS00910 at 223.944 kb on - strand, within HMPREF1078_RS00910 at 223.944 kb on - strand, within HMPREF1078_RS00910 at 223.944 kb on - strand, within HMPREF1078_RS00910 at 223.944 kb on - strand, within HMPREF1078_RS00910 at 223.944 kb on - strand, within HMPREF1078_RS00910 at 223.944 kb on - strand, within HMPREF1078_RS00910 at 223.944 kb on - strand, within HMPREF1078_RS00910 at 223.944 kb on - strand, within HMPREF1078_RS00910 at 223.990 kb on + strand, within HMPREF1078_RS00910 at 223.990 kb on + strand, within HMPREF1078_RS00910 at 223.990 kb on + strand, within HMPREF1078_RS00910 at 223.990 kb on + strand, within HMPREF1078_RS00910 at 223.990 kb on + strand, within HMPREF1078_RS00910 at 223.991 kb on - strand, within HMPREF1078_RS00910 at 223.991 kb on - strand, within HMPREF1078_RS00910 at 223.991 kb on - strand, within HMPREF1078_RS00910 at 223.991 kb on - strand, within HMPREF1078_RS00910 at 223.991 kb on - strand, within HMPREF1078_RS00910 at 223.994 kb on + strand, within HMPREF1078_RS00910 at 223.994 kb on + strand, within HMPREF1078_RS00910 at 223.994 kb on + strand, within HMPREF1078_RS00910 at 223.995 kb on - strand, within HMPREF1078_RS00910 at 223.995 kb on - strand, within HMPREF1078_RS00910 at 223.995 kb on - strand, within HMPREF1078_RS00910 at 223.995 kb on - strand, within HMPREF1078_RS00910 at 223.995 kb on - strand, within HMPREF1078_RS00910 at 224.014 kb on - strand, within HMPREF1078_RS00910 at 224.085 kb on + strand at 224.085 kb on + strand at 224.085 kb on + strand at 224.086 kb on - strand at 224.086 kb on - strand at 224.086 kb on - strand at 224.086 kb on - strand at 224.089 kb on + strand at 224.090 kb on - strand at 224.090 kb on - strand at 224.100 kb on + strand at 224.101 kb on - strand at 224.110 kb on - strand at 224.123 kb on - strand at 224.123 kb on - strand at 224.135 kb on - strand at 224.266 kb on + strand at 224.279 kb on + strand at 224.279 kb on + strand at 224.280 kb on - strand at 224.350 kb on + strand at 224.350 kb on + strand at 224.350 kb on + strand at 224.350 kb on + strand at 224.350 kb on + strand at 224.351 kb on - strand at 224.351 kb on - strand at 224.353 kb on + strand at 224.353 kb on + strand at 224.353 kb on + strand at 224.353 kb on + strand at 224.354 kb on - strand at 224.354 kb on - strand at 224.354 kb on - strand at 224.354 kb on - strand at 224.407 kb on + strand at 224.407 kb on + strand at 224.407 kb on + strand at 224.407 kb on + strand at 224.407 kb on + strand at 224.407 kb on + strand at 224.408 kb on - strand at 224.408 kb on - strand at 224.408 kb on - strand at 224.413 kb on - strand at 224.419 kb on + strand at 224.419 kb on + strand at 224.419 kb on + strand at 224.420 kb on - strand at 224.420 kb on - strand at 224.421 kb on + strand at 224.421 kb on + strand at 224.421 kb on + strand at 224.421 kb on + strand at 224.422 kb on - strand at 224.422 kb on - strand at 224.422 kb on - strand at 224.481 kb on + strand at 224.481 kb on + strand at 224.481 kb on + strand at 224.482 kb on - strand at 224.565 kb on + strand, within HMPREF1078_RS00915 at 224.590 kb on + strand, within HMPREF1078_RS00915 at 224.632 kb on - strand, within HMPREF1078_RS00915 at 224.632 kb on - strand, within HMPREF1078_RS00915 at 224.635 kb on + strand, within HMPREF1078_RS00915 at 224.635 kb on + strand, within HMPREF1078_RS00915 at 224.636 kb on - strand, within HMPREF1078_RS00915 at 224.672 kb on + strand, within HMPREF1078_RS00915 at 224.672 kb on + strand, within HMPREF1078_RS00915 at 224.672 kb on + strand, within HMPREF1078_RS00915 at 224.673 kb on - strand, within HMPREF1078_RS00915 at 224.673 kb on - strand, within HMPREF1078_RS00915 at 224.733 kb on + strand, within HMPREF1078_RS00915 at 224.739 kb on + strand, within HMPREF1078_RS00915 at 224.740 kb on - strand, within HMPREF1078_RS00915 at 224.740 kb on - strand, within HMPREF1078_RS00915 at 224.830 kb on + strand, within HMPREF1078_RS00915 at 224.831 kb on - strand, within HMPREF1078_RS00915 at 224.834 kb on + strand, within HMPREF1078_RS00915 at 224.835 kb on - strand, within HMPREF1078_RS00915 at 224.835 kb on - strand, within HMPREF1078_RS00915 at 224.835 kb on - strand, within HMPREF1078_RS00915 at 224.838 kb on + strand, within HMPREF1078_RS00915 at 224.838 kb on + strand, within HMPREF1078_RS00915 at 224.854 kb on + strand, within HMPREF1078_RS00915 at 224.855 kb on - strand, within HMPREF1078_RS00915 at 224.855 kb on - strand, within HMPREF1078_RS00915 at 224.920 kb on + strand, within HMPREF1078_RS00915 at 224.925 kb on + strand, within HMPREF1078_RS00915 at 224.925 kb on + strand, within HMPREF1078_RS00915 at 224.926 kb on - strand, within HMPREF1078_RS00915 at 224.936 kb on + strand, within HMPREF1078_RS00915 at 225.061 kb on + strand, within HMPREF1078_RS00915 at 225.061 kb on + strand, within HMPREF1078_RS00915 at 225.061 kb on + strand, within HMPREF1078_RS00915 at 225.061 kb on + strand, within HMPREF1078_RS00915 at 225.068 kb on + strand, within HMPREF1078_RS00915 at 225.068 kb on + strand, within HMPREF1078_RS00915 at 225.068 kb on + strand, within HMPREF1078_RS00915 at 225.068 kb on + strand, within HMPREF1078_RS00915 at 225.069 kb on - strand, within HMPREF1078_RS00915 at 225.069 kb on - strand, within HMPREF1078_RS00915 at 225.069 kb on - strand, within HMPREF1078_RS00915 at 225.122 kb on + strand, within HMPREF1078_RS00915 at 225.128 kb on + strand, within HMPREF1078_RS00915 at 225.128 kb on + strand, within HMPREF1078_RS00915 at 225.128 kb on + strand, within HMPREF1078_RS00915 at 225.128 kb on + strand, within HMPREF1078_RS00915 at 225.129 kb on - strand, within HMPREF1078_RS00915 at 225.129 kb on - strand, within HMPREF1078_RS00915 at 225.129 kb on - strand, within HMPREF1078_RS00915 at 225.163 kb on + strand, within HMPREF1078_RS00915 at 225.164 kb on - strand, within HMPREF1078_RS00915 at 225.165 kb on + strand, within HMPREF1078_RS00915 at 225.165 kb on + strand, within HMPREF1078_RS00915 at 225.165 kb on + strand, within HMPREF1078_RS00915 at 225.166 kb on - strand, within HMPREF1078_RS00915 at 225.166 kb on - strand, within HMPREF1078_RS00915 at 225.175 kb on + strand, within HMPREF1078_RS00915 at 225.176 kb on - strand, within HMPREF1078_RS00915 at 225.185 kb on - strand, within HMPREF1078_RS00915 at 225.217 kb on - strand, within HMPREF1078_RS00915 at 225.220 kb on + strand, within HMPREF1078_RS00915 at 225.220 kb on + strand, within HMPREF1078_RS00915 at 225.220 kb on + strand, within HMPREF1078_RS00915 at 225.220 kb on + strand, within HMPREF1078_RS00915 at 225.221 kb on - strand, within HMPREF1078_RS00915 at 225.221 kb on - strand, within HMPREF1078_RS00915 at 225.221 kb on - strand, within HMPREF1078_RS00915 at 225.222 kb on - strand, within HMPREF1078_RS00915 at 225.223 kb on + strand, within HMPREF1078_RS00915 at 225.223 kb on + strand, within HMPREF1078_RS00915 at 225.223 kb on + strand, within HMPREF1078_RS00915 at 225.223 kb on + strand, within HMPREF1078_RS00915 at 225.224 kb on - strand, within HMPREF1078_RS00915 at 225.225 kb on + strand, within HMPREF1078_RS00915 at 225.226 kb on - strand, within HMPREF1078_RS00915 at 225.226 kb on - strand, within HMPREF1078_RS00915 at 225.245 kb on + strand, within HMPREF1078_RS00915 at 225.245 kb on + strand, within HMPREF1078_RS00915 at 225.245 kb on + strand, within HMPREF1078_RS00915 at 225.245 kb on + strand, within HMPREF1078_RS00915 at 225.245 kb on + strand, within HMPREF1078_RS00915 at 225.246 kb on - strand, within HMPREF1078_RS00915 at 225.298 kb on + strand, within HMPREF1078_RS00915 at 225.298 kb on + strand, within HMPREF1078_RS00915 at 225.298 kb on + strand, within HMPREF1078_RS00915 at 225.298 kb on + strand, within HMPREF1078_RS00915 at 225.299 kb on - strand, within HMPREF1078_RS00915 at 225.307 kb on - strand, within HMPREF1078_RS00915 at 225.352 kb on - strand, within HMPREF1078_RS00915 at 225.354 kb on + strand, within HMPREF1078_RS00915 at 225.355 kb on - strand, within HMPREF1078_RS00915 at 225.355 kb on - strand, within HMPREF1078_RS00915 at 225.355 kb on - strand, within HMPREF1078_RS00915 at 225.365 kb on - strand, within HMPREF1078_RS00915 at 225.365 kb on - strand, within HMPREF1078_RS00915 at 225.365 kb on - strand, within HMPREF1078_RS00915 at 225.365 kb on - strand, within HMPREF1078_RS00915 at 225.517 kb on + strand, within HMPREF1078_RS00915 at 225.598 kb on + strand, within HMPREF1078_RS00915 at 225.614 kb on - strand, within HMPREF1078_RS00915 at 225.615 kb on + strand, within HMPREF1078_RS00915 at 225.616 kb on - strand, within HMPREF1078_RS00915 at 225.616 kb on - strand, within HMPREF1078_RS00915 at 225.616 kb on - strand, within HMPREF1078_RS00915 at 225.694 kb on - strand, within HMPREF1078_RS00915 at 225.699 kb on - strand, within HMPREF1078_RS00915 at 225.709 kb on + strand, within HMPREF1078_RS00915 at 225.709 kb on + strand, within HMPREF1078_RS00915 at 225.709 kb on + strand, within HMPREF1078_RS00915 at 225.787 kb on + strand, within HMPREF1078_RS00915 at 225.789 kb on + strand, within HMPREF1078_RS00915 at 225.789 kb on + strand, within HMPREF1078_RS00915 at 225.907 kb on + strand, within HMPREF1078_RS00915 at 225.925 kb on + strand, within HMPREF1078_RS00915 at 225.925 kb on + strand, within HMPREF1078_RS00915 at 225.926 kb on - strand, within HMPREF1078_RS00915 at 225.926 kb on - strand, within HMPREF1078_RS00915 at 225.927 kb on + strand, within HMPREF1078_RS00915 at 225.927 kb on + strand, within HMPREF1078_RS00915 at 225.927 kb on + strand, within HMPREF1078_RS00915 at 225.928 kb on - strand, within HMPREF1078_RS00915 at 225.928 kb on - strand, within HMPREF1078_RS00915 at 225.928 kb on - strand, within HMPREF1078_RS00915 at 225.928 kb on - strand, within HMPREF1078_RS00915 at 225.931 kb on + strand, within HMPREF1078_RS00915 at 225.932 kb on - strand, within HMPREF1078_RS00915 at 225.944 kb on + strand, within HMPREF1078_RS00915 at 225.944 kb on + strand, within HMPREF1078_RS00915 at 225.945 kb on - strand, within HMPREF1078_RS00915 at 226.142 kb on - strand, within HMPREF1078_RS00915 at 226.142 kb on - strand, within HMPREF1078_RS00915 at 226.267 kb on - strand, within HMPREF1078_RS00915 at 226.309 kb on + strand, within HMPREF1078_RS00915 at 226.402 kb on - strand at 226.404 kb on + strand at 226.404 kb on + strand at 226.405 kb on - strand at 226.405 kb on - strand at 226.408 kb on + strand at 226.408 kb on + strand at 226.408 kb on + strand at 226.409 kb on - strand at 226.409 kb on - strand at 226.464 kb on + strand at 226.518 kb on + strand at 226.518 kb on + strand at 226.570 kb on + strand at 226.595 kb on + strand at 226.596 kb on - strand at 226.638 kb on + strand at 226.649 kb on + strand at 226.649 kb on + strand at 226.653 kb on + strand at 226.653 kb on + strand at 226.653 kb on + strand at 226.654 kb on - strand at 226.654 kb on - strand at 226.654 kb on - strand at 226.654 kb on - strand at 226.654 kb on - strand at 226.655 kb on + strand at 226.656 kb on - strand at 226.668 kb on + strand at 226.669 kb on - strand at 226.678 kb on + strand at 226.678 kb on + strand at 226.678 kb on + strand at 226.679 kb on - strand at 226.688 kb on - strand at 226.733 kb on - strand at 226.765 kb on + strand at 226.766 kb on - strand at 226.812 kb on + strand at 226.813 kb on - strand at 226.848 kb on - strand at 226.849 kb on + strand at 226.850 kb on - strand at 226.850 kb on - strand at 226.852 kb on - strand at 226.863 kb on + strand at 226.863 kb on + strand at 226.863 kb on + strand at 226.864 kb on - strand at 226.864 kb on - strand at 226.864 kb on - strand at 226.864 kb on - strand at 226.867 kb on + strand at 226.867 kb on + strand at 226.867 kb on + strand at 226.867 kb on + strand at 226.867 kb on + strand at 226.867 kb on + strand at 226.867 kb on + strand at 226.867 kb on + strand at 226.867 kb on + strand at 226.868 kb on - strand at 226.868 kb on - strand at 226.868 kb on - strand at 226.868 kb on - strand at 226.868 kb on - strand at 226.868 kb on - strand at 226.868 kb on - strand at 226.868 kb on - strand at 226.893 kb on + strand at 226.893 kb on + strand at 226.893 kb on + strand at 226.916 kb on + strand at 226.918 kb on + strand at 226.918 kb on + strand at 226.929 kb on - strand at 226.936 kb on + strand at 226.937 kb on - strand at 226.940 kb on + strand at 226.941 kb on + strand at 226.941 kb on - strand at 226.947 kb on - strand at 226.992 kb on + strand at 226.992 kb on + strand at 227.001 kb on - strand at 227.008 kb on - strand at 227.024 kb on - strand at 227.038 kb on + strand at 227.038 kb on + strand at 227.039 kb on - strand at 227.039 kb on - strand at 227.048 kb on + strand at 227.048 kb on + strand at 227.048 kb on + strand at 227.048 kb on + strand at 227.049 kb on - strand at 227.049 kb on - strand at 227.099 kb on + strand at 227.108 kb on + strand, within HMPREF1078_RS00925 at 227.108 kb on + strand, within HMPREF1078_RS00925 at 227.108 kb on + strand, within HMPREF1078_RS00925 at 227.108 kb on + strand, within HMPREF1078_RS00925 at 227.109 kb on - strand, within HMPREF1078_RS00925 at 227.109 kb on - strand, within HMPREF1078_RS00925 at 227.109 kb on - strand, within HMPREF1078_RS00925 at 227.235 kb on + strand, within HMPREF1078_RS00925 at 227.235 kb on + strand, within HMPREF1078_RS00925 at 227.236 kb on - strand, within HMPREF1078_RS00925 at 227.236 kb on - strand, within HMPREF1078_RS00925 at 227.239 kb on + strand, within HMPREF1078_RS00925 at 227.239 kb on + strand, within HMPREF1078_RS00925 at 227.240 kb on - strand, within HMPREF1078_RS00925 at 227.240 kb on - strand, within HMPREF1078_RS00925 at 227.246 kb on + strand, within HMPREF1078_RS00925 at 227.246 kb on + strand, within HMPREF1078_RS00925 at 227.246 kb on + strand, within HMPREF1078_RS00925 at 227.247 kb on - strand, within HMPREF1078_RS00925 at 227.256 kb on + strand, within HMPREF1078_RS00925 at 227.263 kb on + strand, within HMPREF1078_RS00925 at 227.264 kb on - strand, within HMPREF1078_RS00925 at 227.297 kb on + strand, within HMPREF1078_RS00925 at 227.297 kb on + strand, within HMPREF1078_RS00925 at 227.297 kb on + strand, within HMPREF1078_RS00925 at 227.297 kb on + strand, within HMPREF1078_RS00925 at 227.321 kb on + strand, within HMPREF1078_RS00925 at 227.321 kb on + strand, within HMPREF1078_RS00925 at 227.321 kb on + strand, within HMPREF1078_RS00925 at 227.322 kb on - strand, within HMPREF1078_RS00925 at 227.322 kb on - strand, within HMPREF1078_RS00925 at 227.322 kb on - strand, within HMPREF1078_RS00925 at 227.464 kb on - strand, within HMPREF1078_RS00925 at 227.488 kb on - strand, within HMPREF1078_RS00925 at 227.488 kb on - strand, within HMPREF1078_RS00925 at 227.496 kb on - strand, within HMPREF1078_RS00925 at 227.496 kb on - strand, within HMPREF1078_RS00925 at 227.508 kb on + strand, within HMPREF1078_RS00925 at 227.516 kb on - strand at 227.516 kb on - strand at 227.532 kb on + strand at 227.533 kb on - strand at 227.564 kb on + strand at 227.564 kb on + strand at 227.565 kb on - strand at 227.565 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day2 remove 223,274 + HMPREF1078_RS00910 0.57 -0.7 223,274 + HMPREF1078_RS00910 0.57 +0.1 223,304 + HMPREF1078_RS00910 0.58 +0.2 223,315 + HMPREF1078_RS00910 0.59 -0.5 223,315 + HMPREF1078_RS00910 0.59 +0.2 223,315 + HMPREF1078_RS00910 0.59 -0.2 223,315 + HMPREF1078_RS00910 0.59 -1.4 223,316 - HMPREF1078_RS00910 0.59 +0.3 223,318 + HMPREF1078_RS00910 0.59 -0.9 223,333 + HMPREF1078_RS00910 0.59 +0.6 223,333 + HMPREF1078_RS00910 0.59 +0.5 223,349 + HMPREF1078_RS00910 0.60 -0.5 223,374 + HMPREF1078_RS00910 0.61 -0.7 223,375 - HMPREF1078_RS00910 0.61 -0.7 223,384 + HMPREF1078_RS00910 0.62 +0.8 223,384 + HMPREF1078_RS00910 0.62 -0.6 223,385 - HMPREF1078_RS00910 0.62 -0.9 223,385 - HMPREF1078_RS00910 0.62 -1.7 223,385 - HMPREF1078_RS00910 0.62 -0.5 223,390 + HMPREF1078_RS00910 0.62 -0.9 223,391 - HMPREF1078_RS00910 0.62 -0.7 223,391 - HMPREF1078_RS00910 0.62 -0.4 223,392 + HMPREF1078_RS00910 0.62 +1.3 223,392 + HMPREF1078_RS00910 0.62 -0.8 223,393 - HMPREF1078_RS00910 0.62 +0.8 223,393 - HMPREF1078_RS00910 0.62 -1.5 223,404 + HMPREF1078_RS00910 0.63 -2.6 223,405 - HMPREF1078_RS00910 0.63 -0.2 223,405 - HMPREF1078_RS00910 0.63 -1.7 223,405 - HMPREF1078_RS00910 0.63 -0.1 223,456 + HMPREF1078_RS00910 0.65 +0.6 223,457 - HMPREF1078_RS00910 0.65 +0.4 223,477 + HMPREF1078_RS00910 0.66 +0.4 223,479 + HMPREF1078_RS00910 0.66 -0.5 223,494 + HMPREF1078_RS00910 0.66 +3.0 223,524 + HMPREF1078_RS00910 0.68 +0.0 223,525 - HMPREF1078_RS00910 0.68 +1.0 223,578 + HMPREF1078_RS00910 0.70 +0.2 223,590 + HMPREF1078_RS00910 0.71 -0.5 223,601 - HMPREF1078_RS00910 0.71 -0.7 223,602 + HMPREF1078_RS00910 0.71 +0.0 223,602 + HMPREF1078_RS00910 0.71 -2.2 223,602 + HMPREF1078_RS00910 0.71 +1.0 223,603 - HMPREF1078_RS00910 0.71 +0.0 223,603 - HMPREF1078_RS00910 0.71 +0.0 223,603 - HMPREF1078_RS00910 0.71 -0.2 223,603 - HMPREF1078_RS00910 0.71 -2.5 223,671 + HMPREF1078_RS00910 0.74 +1.2 223,671 + HMPREF1078_RS00910 0.74 +0.4 223,672 - HMPREF1078_RS00910 0.74 +1.4 223,672 - HMPREF1078_RS00910 0.74 -0.7 223,685 + HMPREF1078_RS00910 0.75 -0.5 223,713 + HMPREF1078_RS00910 0.76 -0.2 223,714 - HMPREF1078_RS00910 0.76 +0.2 223,714 - HMPREF1078_RS00910 0.76 +1.0 223,717 + HMPREF1078_RS00910 0.76 +0.5 223,717 + HMPREF1078_RS00910 0.76 -0.4 223,718 - HMPREF1078_RS00910 0.76 -0.7 223,718 - HMPREF1078_RS00910 0.76 -1.5 223,718 - HMPREF1078_RS00910 0.76 -0.3 223,758 + HMPREF1078_RS00910 0.78 -0.7 223,774 + HMPREF1078_RS00910 0.79 +1.4 223,774 + HMPREF1078_RS00910 0.79 -0.6 223,774 + HMPREF1078_RS00910 0.79 +1.3 223,774 + HMPREF1078_RS00910 0.79 -0.1 223,775 - HMPREF1078_RS00910 0.79 -0.6 223,775 - HMPREF1078_RS00910 0.79 -1.6 223,775 - HMPREF1078_RS00910 0.79 +0.3 223,775 - HMPREF1078_RS00910 0.79 -0.2 223,803 + HMPREF1078_RS00910 0.80 -1.5 223,803 + HMPREF1078_RS00910 0.80 -1.5 223,804 - HMPREF1078_RS00910 0.80 -2.6 223,811 - HMPREF1078_RS00910 0.80 +0.4 223,822 + HMPREF1078_RS00910 0.81 +1.8 223,822 + HMPREF1078_RS00910 0.81 -1.2 223,823 - HMPREF1078_RS00910 0.81 -0.4 223,823 - HMPREF1078_RS00910 0.81 -0.2 223,850 - HMPREF1078_RS00910 0.82 +0.2 223,850 - HMPREF1078_RS00910 0.82 -0.6 223,875 + HMPREF1078_RS00910 0.83 +0.7 223,876 - HMPREF1078_RS00910 0.83 -0.6 223,876 - HMPREF1078_RS00910 0.83 -0.5 223,876 - HMPREF1078_RS00910 0.83 -0.7 223,879 + HMPREF1078_RS00910 0.83 +0.5 223,879 + HMPREF1078_RS00910 0.83 -0.1 223,880 - HMPREF1078_RS00910 0.83 -1.4 223,901 - HMPREF1078_RS00910 0.84 -1.5 223,918 - HMPREF1078_RS00910 0.85 -1.8 223,939 + HMPREF1078_RS00910 0.86 -2.3 223,943 + HMPREF1078_RS00910 0.86 +0.8 223,943 + HMPREF1078_RS00910 0.86 -0.5 223,944 - HMPREF1078_RS00910 0.86 +0.8 223,944 - HMPREF1078_RS00910 0.86 +0.8 223,944 - HMPREF1078_RS00910 0.86 +0.8 223,944 - HMPREF1078_RS00910 0.86 -1.6 223,944 - HMPREF1078_RS00910 0.86 +0.6 223,944 - HMPREF1078_RS00910 0.86 -0.2 223,944 - HMPREF1078_RS00910 0.86 -0.3 223,944 - HMPREF1078_RS00910 0.86 -0.3 223,990 + HMPREF1078_RS00910 0.88 +0.8 223,990 + HMPREF1078_RS00910 0.88 -1.9 223,990 + HMPREF1078_RS00910 0.88 +0.9 223,990 + HMPREF1078_RS00910 0.88 -0.9 223,990 + HMPREF1078_RS00910 0.88 +2.8 223,991 - HMPREF1078_RS00910 0.88 -1.5 223,991 - HMPREF1078_RS00910 0.88 -2.2 223,991 - HMPREF1078_RS00910 0.88 +1.5 223,991 - HMPREF1078_RS00910 0.88 -2.3 223,991 - HMPREF1078_RS00910 0.88 -1.2 223,994 + HMPREF1078_RS00910 0.88 +1.8 223,994 + HMPREF1078_RS00910 0.88 +0.1 223,994 + HMPREF1078_RS00910 0.88 -0.8 223,995 - HMPREF1078_RS00910 0.88 -1.0 223,995 - HMPREF1078_RS00910 0.88 -0.8 223,995 - HMPREF1078_RS00910 0.88 -1.7 223,995 - HMPREF1078_RS00910 0.88 -3.1 223,995 - HMPREF1078_RS00910 0.88 -1.7 224,014 - HMPREF1078_RS00910 0.89 -2.6 224,085 + -1.5 224,085 + +0.8 224,085 + -1.8 224,086 - -0.6 224,086 - +0.8 224,086 - -0.2 224,086 - -0.2 224,089 + +0.7 224,090 - -1.0 224,090 - +1.8 224,100 + -0.3 224,101 - -1.3 224,110 - -0.4 224,123 - -0.5 224,123 - +0.3 224,135 - +1.8 224,266 + -0.7 224,279 + -0.2 224,279 + -2.5 224,280 - -1.7 224,350 + -2.0 224,350 + -0.5 224,350 + -0.0 224,350 + -0.8 224,350 + -0.9 224,351 - +1.3 224,351 - -0.2 224,353 + -0.7 224,353 + -0.3 224,353 + +0.0 224,353 + +1.1 224,354 - -0.9 224,354 - -0.4 224,354 - -2.1 224,354 - -0.9 224,407 + -0.7 224,407 + +0.7 224,407 + +0.4 224,407 + -1.0 224,407 + -0.7 224,407 + -0.5 224,408 - -0.9 224,408 - -0.7 224,408 - -1.9 224,413 - -2.3 224,419 + +0.5 224,419 + +0.7 224,419 + +0.0 224,420 - -2.1 224,420 - -0.9 224,421 + -0.9 224,421 + -3.2 224,421 + -2.4 224,421 + -0.2 224,422 - -2.2 224,422 - -2.3 224,422 - -0.7 224,481 + +0.7 224,481 + -2.2 224,481 + -1.1 224,482 - -2.1 224,565 + HMPREF1078_RS00915 0.13 -0.2 224,590 + HMPREF1078_RS00915 0.14 -0.4 224,632 - HMPREF1078_RS00915 0.16 -0.7 224,632 - HMPREF1078_RS00915 0.16 -2.0 224,635 + HMPREF1078_RS00915 0.16 -2.2 224,635 + HMPREF1078_RS00915 0.16 +0.0 224,636 - HMPREF1078_RS00915 0.16 -1.7 224,672 + HMPREF1078_RS00915 0.17 -0.0 224,672 + HMPREF1078_RS00915 0.17 -0.6 224,672 + HMPREF1078_RS00915 0.17 -0.8 224,673 - HMPREF1078_RS00915 0.17 +0.3 224,673 - HMPREF1078_RS00915 0.17 -0.7 224,733 + HMPREF1078_RS00915 0.20 -0.3 224,739 + HMPREF1078_RS00915 0.20 +1.3 224,740 - HMPREF1078_RS00915 0.20 -0.0 224,740 - HMPREF1078_RS00915 0.20 -0.3 224,830 + HMPREF1078_RS00915 0.24 -0.7 224,831 - HMPREF1078_RS00915 0.24 -1.5 224,834 + HMPREF1078_RS00915 0.24 -1.4 224,835 - HMPREF1078_RS00915 0.24 +1.0 224,835 - HMPREF1078_RS00915 0.24 -1.3 224,835 - HMPREF1078_RS00915 0.24 -2.1 224,838 + HMPREF1078_RS00915 0.25 +0.4 224,838 + HMPREF1078_RS00915 0.25 +0.8 224,854 + HMPREF1078_RS00915 0.25 -0.6 224,855 - HMPREF1078_RS00915 0.25 -0.7 224,855 - HMPREF1078_RS00915 0.25 +0.1 224,920 + HMPREF1078_RS00915 0.28 -0.0 224,925 + HMPREF1078_RS00915 0.28 -2.2 224,925 + HMPREF1078_RS00915 0.28 -2.1 224,926 - HMPREF1078_RS00915 0.28 -2.0 224,936 + HMPREF1078_RS00915 0.29 +0.8 225,061 + HMPREF1078_RS00915 0.34 -1.0 225,061 + HMPREF1078_RS00915 0.34 -0.6 225,061 + HMPREF1078_RS00915 0.34 +0.9 225,061 + HMPREF1078_RS00915 0.34 -0.5 225,068 + HMPREF1078_RS00915 0.35 -2.8 225,068 + HMPREF1078_RS00915 0.35 -0.9 225,068 + HMPREF1078_RS00915 0.35 +0.2 225,068 + HMPREF1078_RS00915 0.35 +1.1 225,069 - HMPREF1078_RS00915 0.35 -3.5 225,069 - HMPREF1078_RS00915 0.35 -0.7 225,069 - HMPREF1078_RS00915 0.35 +0.8 225,122 + HMPREF1078_RS00915 0.37 +0.1 225,128 + HMPREF1078_RS00915 0.37 +0.3 225,128 + HMPREF1078_RS00915 0.37 -0.1 225,128 + HMPREF1078_RS00915 0.37 -1.6 225,128 + HMPREF1078_RS00915 0.37 +1.1 225,129 - HMPREF1078_RS00915 0.37 +1.0 225,129 - HMPREF1078_RS00915 0.37 -0.7 225,129 - HMPREF1078_RS00915 0.37 -0.7 225,163 + HMPREF1078_RS00915 0.39 +0.2 225,164 - HMPREF1078_RS00915 0.39 +0.4 225,165 + HMPREF1078_RS00915 0.39 -1.0 225,165 + HMPREF1078_RS00915 0.39 -1.1 225,165 + HMPREF1078_RS00915 0.39 -1.2 225,166 - HMPREF1078_RS00915 0.39 -0.5 225,166 - HMPREF1078_RS00915 0.39 +0.8 225,175 + HMPREF1078_RS00915 0.39 +3.2 225,176 - HMPREF1078_RS00915 0.39 -0.2 225,185 - HMPREF1078_RS00915 0.40 -0.3 225,217 - HMPREF1078_RS00915 0.41 -0.5 225,220 + HMPREF1078_RS00915 0.41 -0.8 225,220 + HMPREF1078_RS00915 0.41 -1.2 225,220 + HMPREF1078_RS00915 0.41 -1.2 225,220 + HMPREF1078_RS00915 0.41 -0.7 225,221 - HMPREF1078_RS00915 0.41 -1.0 225,221 - HMPREF1078_RS00915 0.41 +1.4 225,221 - HMPREF1078_RS00915 0.41 -0.2 225,222 - HMPREF1078_RS00915 0.41 +0.7 225,223 + HMPREF1078_RS00915 0.41 -0.7 225,223 + HMPREF1078_RS00915 0.41 -2.3 225,223 + HMPREF1078_RS00915 0.41 -0.2 225,223 + HMPREF1078_RS00915 0.41 -1.5 225,224 - HMPREF1078_RS00915 0.41 +1.1 225,225 + HMPREF1078_RS00915 0.41 -0.4 225,226 - HMPREF1078_RS00915 0.41 -0.5 225,226 - HMPREF1078_RS00915 0.41 -2.3 225,245 + HMPREF1078_RS00915 0.42 +0.6 225,245 + HMPREF1078_RS00915 0.42 -1.1 225,245 + HMPREF1078_RS00915 0.42 -0.7 225,245 + HMPREF1078_RS00915 0.42 +1.1 225,245 + HMPREF1078_RS00915 0.42 -0.7 225,246 - HMPREF1078_RS00915 0.42 -0.2 225,298 + HMPREF1078_RS00915 0.45 -1.1 225,298 + HMPREF1078_RS00915 0.45 +0.6 225,298 + HMPREF1078_RS00915 0.45 +1.0 225,298 + HMPREF1078_RS00915 0.45 -1.5 225,299 - HMPREF1078_RS00915 0.45 -2.2 225,307 - HMPREF1078_RS00915 0.45 -0.5 225,352 - HMPREF1078_RS00915 0.47 +0.7 225,354 + HMPREF1078_RS00915 0.47 -2.0 225,355 - HMPREF1078_RS00915 0.47 +0.3 225,355 - HMPREF1078_RS00915 0.47 -1.6 225,355 - HMPREF1078_RS00915 0.47 -0.7 225,365 - HMPREF1078_RS00915 0.48 -1.7 225,365 - HMPREF1078_RS00915 0.48 +0.0 225,365 - HMPREF1078_RS00915 0.48 +0.6 225,365 - HMPREF1078_RS00915 0.48 +0.2 225,517 + HMPREF1078_RS00915 0.54 -0.6 225,598 + HMPREF1078_RS00915 0.58 +0.7 225,614 - HMPREF1078_RS00915 0.58 -0.6 225,615 + HMPREF1078_RS00915 0.58 -2.5 225,616 - HMPREF1078_RS00915 0.58 -1.5 225,616 - HMPREF1078_RS00915 0.58 -2.6 225,616 - HMPREF1078_RS00915 0.58 +0.8 225,694 - HMPREF1078_RS00915 0.62 -0.5 225,699 - HMPREF1078_RS00915 0.62 +1.8 225,709 + HMPREF1078_RS00915 0.62 -0.5 225,709 + HMPREF1078_RS00915 0.62 -1.4 225,709 + HMPREF1078_RS00915 0.62 -1.5 225,787 + HMPREF1078_RS00915 0.66 +0.3 225,789 + HMPREF1078_RS00915 0.66 +0.2 225,789 + HMPREF1078_RS00915 0.66 -1.9 225,907 + HMPREF1078_RS00915 0.71 -0.6 225,925 + HMPREF1078_RS00915 0.72 +0.1 225,925 + HMPREF1078_RS00915 0.72 +0.4 225,926 - HMPREF1078_RS00915 0.72 +0.5 225,926 - HMPREF1078_RS00915 0.72 +0.3 225,927 + HMPREF1078_RS00915 0.72 +0.5 225,927 + HMPREF1078_RS00915 0.72 +1.8 225,927 + HMPREF1078_RS00915 0.72 +0.1 225,928 - HMPREF1078_RS00915 0.72 -0.7 225,928 - HMPREF1078_RS00915 0.72 -0.4 225,928 - HMPREF1078_RS00915 0.72 -0.5 225,928 - HMPREF1078_RS00915 0.72 -2.6 225,931 + HMPREF1078_RS00915 0.72 -0.8 225,932 - HMPREF1078_RS00915 0.72 -0.1 225,944 + HMPREF1078_RS00915 0.73 -1.2 225,944 + HMPREF1078_RS00915 0.73 +1.7 225,945 - HMPREF1078_RS00915 0.73 -2.0 226,142 - HMPREF1078_RS00915 0.81 +0.3 226,142 - HMPREF1078_RS00915 0.81 -0.3 226,267 - HMPREF1078_RS00915 0.87 -0.2 226,309 + HMPREF1078_RS00915 0.89 -2.2 226,402 - -1.1 226,404 + +0.1 226,404 + -0.0 226,405 - -2.0 226,405 - +0.8 226,408 + -1.6 226,408 + +0.4 226,408 + +0.4 226,409 - -1.2 226,409 - -0.7 226,464 + +0.3 226,518 + +2.1 226,518 + +1.0 226,570 + +1.3 226,595 + +1.4 226,596 - +0.8 226,638 + +0.3 226,649 + +1.4 226,649 + +1.8 226,653 + -3.9 226,653 + -2.0 226,653 + -0.3 226,654 - +0.5 226,654 - +0.7 226,654 - +1.2 226,654 - +0.2 226,654 - -0.4 226,655 + -1.9 226,656 - -0.1 226,668 + +0.9 226,669 - +0.4 226,678 + +0.8 226,678 + +1.2 226,678 + +0.8 226,679 - -0.2 226,688 - -0.7 226,733 - -0.7 226,765 + -0.5 226,766 - +1.1 226,812 + +0.5 226,813 - -0.5 226,848 - +0.2 226,849 + -2.5 226,850 - -1.2 226,850 - +0.6 226,852 - -0.2 226,863 + -0.0 226,863 + -0.2 226,863 + +2.4 226,864 - +1.0 226,864 - +0.3 226,864 - -0.7 226,864 - -0.2 226,867 + -1.2 226,867 + -0.3 226,867 + +0.7 226,867 + +0.5 226,867 + -0.2 226,867 + +0.3 226,867 + +0.7 226,867 + +0.6 226,867 + -0.3 226,868 - +0.8 226,868 - +1.4 226,868 - +1.6 226,868 - -0.0 226,868 - +0.9 226,868 - +0.6 226,868 - +0.8 226,868 - -0.3 226,893 + -0.3 226,893 + +0.8 226,893 + -2.3 226,916 + -0.8 226,918 + +0.6 226,918 + -0.1 226,929 - -1.3 226,936 + -0.7 226,937 - +0.8 226,940 + -1.2 226,941 + +0.2 226,941 - +0.5 226,947 - -0.3 226,992 + -0.2 226,992 + -0.9 227,001 - -3.2 227,008 - +0.2 227,024 - +0.6 227,038 + +0.6 227,038 + +0.8 227,039 - -5.7 227,039 - -4.6 227,048 + -0.2 227,048 + -0.7 227,048 + -0.3 227,048 + +1.7 227,049 - -1.5 227,049 - -2.0 227,099 + -4.1 227,108 + HMPREF1078_RS00925 0.11 -2.9 227,108 + HMPREF1078_RS00925 0.11 +0.8 227,108 + HMPREF1078_RS00925 0.11 -2.2 227,108 + HMPREF1078_RS00925 0.11 -4.1 227,109 - HMPREF1078_RS00925 0.11 -1.5 227,109 - HMPREF1078_RS00925 0.11 -3.7 227,109 - HMPREF1078_RS00925 0.11 -2.0 227,235 + HMPREF1078_RS00925 0.35 -4.3 227,235 + HMPREF1078_RS00925 0.35 -3.7 227,236 - HMPREF1078_RS00925 0.35 -3.9 227,236 - HMPREF1078_RS00925 0.35 -4.1 227,239 + HMPREF1078_RS00925 0.36 -5.3 227,239 + HMPREF1078_RS00925 0.36 -4.6 227,240 - HMPREF1078_RS00925 0.36 -4.9 227,240 - HMPREF1078_RS00925 0.36 -2.2 227,246 + HMPREF1078_RS00925 0.37 -0.7 227,246 + HMPREF1078_RS00925 0.37 -1.5 227,246 + HMPREF1078_RS00925 0.37 -3.9 227,247 - HMPREF1078_RS00925 0.38 -4.7 227,256 + HMPREF1078_RS00925 0.39 -3.2 227,263 + HMPREF1078_RS00925 0.41 -3.9 227,264 - HMPREF1078_RS00925 0.41 -3.5 227,297 + HMPREF1078_RS00925 0.47 -4.7 227,297 + HMPREF1078_RS00925 0.47 -3.3 227,297 + HMPREF1078_RS00925 0.47 -1.2 227,297 + HMPREF1078_RS00925 0.47 -4.3 227,321 + HMPREF1078_RS00925 0.52 -2.6 227,321 + HMPREF1078_RS00925 0.52 -5.0 227,321 + HMPREF1078_RS00925 0.52 -3.1 227,322 - HMPREF1078_RS00925 0.52 -0.2 227,322 - HMPREF1078_RS00925 0.52 -3.6 227,322 - HMPREF1078_RS00925 0.52 -4.6 227,464 - HMPREF1078_RS00925 0.80 -3.7 227,488 - HMPREF1078_RS00925 0.85 -4.0 227,488 - HMPREF1078_RS00925 0.85 -3.1 227,496 - HMPREF1078_RS00925 0.86 -2.6 227,496 - HMPREF1078_RS00925 0.86 -4.1 227,508 + HMPREF1078_RS00925 0.88 -3.6 227,516 - -2.7 227,516 - -3.8 227,532 + -4.5 227,533 - -4.0 227,564 + -0.5 227,564 + -0.2 227,565 - +0.4 227,565 - +0.3
Or see this region's nucleotide sequence