Experiment: MoLS4 without Nicotinic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2436 and DVU2437 are separated by 77 nucleotides DVU2437 and DVU2438 are separated by 0 nucleotides
DVU2436: DVU2436 - conserved hypothetical protein (TIGR), at 2,540,394 to 2,541,026
DVU2436
DVU2437: DVU2437 - ABC transporter, permease protein (TIGR), at 2,541,104 to 2,542,324
DVU2437
DVU2438: DVU2438 - ABC transporter, ATP-binding protein, authentic frameshift (TIGR), at 2,542,325 to 2,544,687
DVU2438
Position (kb)
2541
2542
2543 Strain fitness (log2 ratio)
-2
-1
0
1 at 2540.279 kb on - strand at 2540.338 kb on + strand at 2540.338 kb on + strand at 2540.346 kb on - strand at 2540.346 kb on - strand at 2540.386 kb on - strand at 2540.392 kb on + strand at 2540.480 kb on - strand, within DVU2436 at 2540.528 kb on - strand, within DVU2436 at 2540.556 kb on + strand, within DVU2436 at 2540.732 kb on - strand, within DVU2436 at 2540.813 kb on - strand, within DVU2436 at 2540.910 kb on + strand, within DVU2436 at 2540.966 kb on - strand at 2540.986 kb on - strand at 2541.106 kb on + strand at 2541.167 kb on - strand at 2541.230 kb on + strand, within DVU2437 at 2541.239 kb on - strand, within DVU2437 at 2541.291 kb on - strand, within DVU2437 at 2541.318 kb on + strand, within DVU2437 at 2541.326 kb on - strand, within DVU2437 at 2541.377 kb on + strand, within DVU2437 at 2541.385 kb on - strand, within DVU2437 at 2541.388 kb on + strand, within DVU2437 at 2541.388 kb on + strand, within DVU2437 at 2541.392 kb on - strand, within DVU2437 at 2541.396 kb on - strand, within DVU2437 at 2541.446 kb on - strand, within DVU2437 at 2541.493 kb on + strand, within DVU2437 at 2541.522 kb on - strand, within DVU2437 at 2541.713 kb on - strand, within DVU2437 at 2541.748 kb on - strand, within DVU2437 at 2541.770 kb on + strand, within DVU2437 at 2541.806 kb on + strand, within DVU2437 at 2541.927 kb on + strand, within DVU2437 at 2541.927 kb on + strand, within DVU2437 at 2541.935 kb on - strand, within DVU2437 at 2542.018 kb on + strand, within DVU2437 at 2542.027 kb on - strand, within DVU2437 at 2542.083 kb on - strand, within DVU2437 at 2542.202 kb on + strand, within DVU2437 at 2542.227 kb on + strand at 2542.275 kb on + strand at 2542.395 kb on - strand at 2542.744 kb on - strand, within DVU2438 at 2542.765 kb on - strand, within DVU2438 at 2542.862 kb on - strand, within DVU2438 at 2542.923 kb on - strand, within DVU2438 at 2543.047 kb on - strand, within DVU2438 at 2543.067 kb on + strand, within DVU2438 at 2543.067 kb on + strand, within DVU2438 at 2543.168 kb on - strand, within DVU2438 at 2543.168 kb on - strand, within DVU2438 at 2543.298 kb on + strand, within DVU2438
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 without Nicotinic remove 2,540,279 - +0.1 2,540,338 + +0.7 2,540,338 + -0.1 2,540,346 - -0.2 2,540,346 - +1.1 2,540,386 - +0.3 2,540,392 + -0.1 2,540,480 - DVU2436 0.14 +0.1 2,540,528 - DVU2436 0.21 -0.3 2,540,556 + DVU2436 0.26 +0.2 2,540,732 - DVU2436 0.53 -0.2 2,540,813 - DVU2436 0.66 -0.2 2,540,910 + DVU2436 0.82 +0.2 2,540,966 - -1.0 2,540,986 - -0.1 2,541,106 + +0.0 2,541,167 - -0.0 2,541,230 + DVU2437 0.10 -0.1 2,541,239 - DVU2437 0.11 +0.1 2,541,291 - DVU2437 0.15 +0.6 2,541,318 + DVU2437 0.18 -1.0 2,541,326 - DVU2437 0.18 -0.3 2,541,377 + DVU2437 0.22 +0.2 2,541,385 - DVU2437 0.23 -1.1 2,541,388 + DVU2437 0.23 +1.0 2,541,388 + DVU2437 0.23 -0.7 2,541,392 - DVU2437 0.24 +0.4 2,541,396 - DVU2437 0.24 -0.0 2,541,446 - DVU2437 0.28 -0.1 2,541,493 + DVU2437 0.32 +0.1 2,541,522 - DVU2437 0.34 -2.0 2,541,713 - DVU2437 0.50 +0.0 2,541,748 - DVU2437 0.53 -0.1 2,541,770 + DVU2437 0.55 -0.6 2,541,806 + DVU2437 0.57 -0.5 2,541,927 + DVU2437 0.67 +1.6 2,541,927 + DVU2437 0.67 +0.5 2,541,935 - DVU2437 0.68 -1.2 2,542,018 + DVU2437 0.75 -0.3 2,542,027 - DVU2437 0.76 -0.1 2,542,083 - DVU2437 0.80 +0.4 2,542,202 + DVU2437 0.90 -0.4 2,542,227 + +0.1 2,542,275 + -0.1 2,542,395 - -0.0 2,542,744 - DVU2438 0.18 -0.0 2,542,765 - DVU2438 0.19 -0.1 2,542,862 - DVU2438 0.23 -0.1 2,542,923 - DVU2438 0.25 +0.2 2,543,047 - DVU2438 0.31 -0.3 2,543,067 + DVU2438 0.31 +0.0 2,543,067 + DVU2438 0.31 -1.3 2,543,168 - DVU2438 0.36 +0.3 2,543,168 - DVU2438 0.36 -0.4 2,543,298 + DVU2438 0.41 -0.3
Or see this region's nucleotide sequence