Experiment: MoYLS4 with Nitrate 50mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0863 and DVU0864 are separated by 137 nucleotides DVU0864 and DVU0865 overlap by 4 nucleotides
DVU0863: DVU0863 - flagellar hook-associated protein 2, putative (TIGR), at 954,684 to 956,411
DVU0863
DVU0864: DVU0864 - glycoprotease family protein, putative (TIGR), at 956,549 to 957,334
DVU0864
DVU0865: DVU0865 - membrane-associated zinc metalloprotease, putative (TIGR), at 957,331 to 958,395
DVU0865
Position (kb) 956
957
958 Strain fitness (log2 ratio) -1
0
1 at 955.626 kb on - strand, within DVU0863 at 955.697 kb on + strand, within DVU0863 at 955.705 kb on - strand, within DVU0863 at 955.837 kb on - strand, within DVU0863 at 955.957 kb on + strand, within DVU0863 at 955.975 kb on - strand, within DVU0863 at 955.977 kb on - strand, within DVU0863 at 956.044 kb on - strand, within DVU0863 at 956.136 kb on - strand, within DVU0863 at 956.200 kb on - strand, within DVU0863 at 956.302 kb on - strand at 956.346 kb on - strand at 956.439 kb on - strand at 956.440 kb on - strand at 956.531 kb on + strand at 956.533 kb on + strand at 956.533 kb on + strand at 956.541 kb on - strand at 956.541 kb on - strand at 956.560 kb on - strand at 956.660 kb on + strand, within DVU0864 at 956.683 kb on + strand, within DVU0864 at 956.685 kb on + strand, within DVU0864 at 957.385 kb on - strand at 957.394 kb on - strand at 958.056 kb on - strand, within DVU0865 at 958.128 kb on - strand, within DVU0865 at 958.309 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Nitrate 50mM remove 955,626 - DVU0863 0.55 -0.1 955,697 + DVU0863 0.59 -0.2 955,705 - DVU0863 0.59 -0.2 955,837 - DVU0863 0.67 -0.5 955,957 + DVU0863 0.74 -0.1 955,975 - DVU0863 0.75 -0.2 955,977 - DVU0863 0.75 +0.1 956,044 - DVU0863 0.79 -0.0 956,136 - DVU0863 0.84 -0.3 956,200 - DVU0863 0.88 -0.7 956,302 - +0.0 956,346 - -0.0 956,439 - +0.6 956,440 - -0.8 956,531 + -1.3 956,533 + -0.2 956,533 + -0.5 956,541 - -0.4 956,541 - +1.4 956,560 - -0.6 956,660 + DVU0864 0.14 -0.4 956,683 + DVU0864 0.17 -1.0 956,685 + DVU0864 0.17 -1.7 957,385 - +1.0 957,394 - -0.9 958,056 - DVU0865 0.68 +0.5 958,128 - DVU0865 0.75 -0.5 958,309 - -0.4
Or see this region's nucleotide sequence