Experiment: MoYLS4 with Tetracyclin 0.001mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0967 and DVU0968 overlap by 4 nucleotides DVU0968 and DVU0969 are separated by 247 nucleotides DVU0969 and DVU0970 are separated by 2 nucleotides DVU0970 and DVU0971 overlap by 1 nucleotides
DVU0967: DVU0967 - amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family (TIGR), at 1,064,266 to 1,065,279
DVU0967
DVU0968: DVU0968 - amino acid ABC transporter, ATP-binding protein (TIGR), at 1,065,276 to 1,066,016
DVU0968
DVU0969: DVU0969 - efflux protein, LysE family (TIGR), at 1,066,264 to 1,067,010
DVU0969
DVU0970: DVU0970 - lipoprotein, putative (TIGR), at 1,067,013 to 1,067,552
DVU0970
DVU0971: DVU0971 - molybdenum cofactor biosynthesis protein (TIGR), at 1,067,552 to 1,068,331
DVU0971
Position (kb)
1066
1067
1068 Strain fitness (log2 ratio)
-1
0
1 at 1065.420 kb on - strand, within DVU0968 at 1065.436 kb on + strand, within DVU0968 at 1065.491 kb on + strand, within DVU0968 at 1065.554 kb on + strand, within DVU0968 at 1065.698 kb on + strand, within DVU0968 at 1065.706 kb on - strand, within DVU0968 at 1065.760 kb on - strand, within DVU0968 at 1065.760 kb on - strand, within DVU0968 at 1065.760 kb on - strand, within DVU0968 at 1065.872 kb on + strand, within DVU0968 at 1065.911 kb on - strand, within DVU0968 at 1065.928 kb on - strand, within DVU0968 at 1065.957 kb on - strand at 1065.983 kb on - strand at 1066.040 kb on - strand at 1066.143 kb on - strand at 1066.258 kb on - strand at 1066.311 kb on - strand at 1066.342 kb on - strand, within DVU0969 at 1066.387 kb on + strand, within DVU0969 at 1066.387 kb on + strand, within DVU0969 at 1066.387 kb on + strand, within DVU0969 at 1066.387 kb on + strand, within DVU0969 at 1066.387 kb on + strand, within DVU0969 at 1066.387 kb on + strand, within DVU0969 at 1066.395 kb on - strand, within DVU0969 at 1066.395 kb on - strand, within DVU0969 at 1066.405 kb on - strand, within DVU0969 at 1066.427 kb on + strand, within DVU0969 at 1066.506 kb on - strand, within DVU0969 at 1066.679 kb on - strand, within DVU0969 at 1066.845 kb on + strand, within DVU0969 at 1066.853 kb on - strand, within DVU0969 at 1066.881 kb on + strand, within DVU0969 at 1066.912 kb on + strand, within DVU0969 at 1066.920 kb on - strand, within DVU0969 at 1066.930 kb on - strand, within DVU0969 at 1067.089 kb on - strand, within DVU0970 at 1067.179 kb on + strand, within DVU0970 at 1067.287 kb on + strand, within DVU0970 at 1067.474 kb on + strand, within DVU0970 at 1067.482 kb on - strand, within DVU0970 at 1067.496 kb on + strand, within DVU0970 at 1067.504 kb on - strand at 1067.597 kb on + strand at 1067.760 kb on + strand, within DVU0971 at 1067.828 kb on - strand, within DVU0971 at 1067.829 kb on + strand, within DVU0971 at 1067.908 kb on + strand, within DVU0971 at 1067.931 kb on + strand, within DVU0971 at 1067.966 kb on - strand, within DVU0971 at 1067.981 kb on + strand, within DVU0971 at 1067.981 kb on + strand, within DVU0971 at 1068.005 kb on + strand, within DVU0971
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Tetracyclin 0.001mg/mL remove 1,065,420 - DVU0968 0.19 -0.4 1,065,436 + DVU0968 0.22 +0.0 1,065,491 + DVU0968 0.29 -0.3 1,065,554 + DVU0968 0.38 +0.0 1,065,698 + DVU0968 0.57 +0.1 1,065,706 - DVU0968 0.58 +0.1 1,065,760 - DVU0968 0.65 -0.4 1,065,760 - DVU0968 0.65 +0.4 1,065,760 - DVU0968 0.65 +0.1 1,065,872 + DVU0968 0.80 +0.1 1,065,911 - DVU0968 0.86 -0.2 1,065,928 - DVU0968 0.88 +0.0 1,065,957 - +0.2 1,065,983 - -0.3 1,066,040 - +0.0 1,066,143 - +0.1 1,066,258 - -0.4 1,066,311 - -0.1 1,066,342 - DVU0969 0.10 +0.3 1,066,387 + DVU0969 0.16 +0.2 1,066,387 + DVU0969 0.16 +0.0 1,066,387 + DVU0969 0.16 +0.1 1,066,387 + DVU0969 0.16 -0.0 1,066,387 + DVU0969 0.16 -0.1 1,066,387 + DVU0969 0.16 -0.5 1,066,395 - DVU0969 0.18 -0.4 1,066,395 - DVU0969 0.18 -0.7 1,066,405 - DVU0969 0.19 -0.2 1,066,427 + DVU0969 0.22 -0.6 1,066,506 - DVU0969 0.32 -0.3 1,066,679 - DVU0969 0.56 -0.9 1,066,845 + DVU0969 0.78 -0.2 1,066,853 - DVU0969 0.79 -0.1 1,066,881 + DVU0969 0.83 -0.4 1,066,912 + DVU0969 0.87 -0.2 1,066,920 - DVU0969 0.88 +0.2 1,066,930 - DVU0969 0.89 -0.3 1,067,089 - DVU0970 0.14 -0.3 1,067,179 + DVU0970 0.31 -1.2 1,067,287 + DVU0970 0.51 -0.3 1,067,474 + DVU0970 0.85 +0.4 1,067,482 - DVU0970 0.87 -0.3 1,067,496 + DVU0970 0.89 -0.1 1,067,504 - +0.4 1,067,597 + -0.1 1,067,760 + DVU0971 0.27 +0.4 1,067,828 - DVU0971 0.35 -0.1 1,067,829 + DVU0971 0.36 -0.2 1,067,908 + DVU0971 0.46 -0.1 1,067,931 + DVU0971 0.49 -1.3 1,067,966 - DVU0971 0.53 -0.0 1,067,981 + DVU0971 0.55 -0.0 1,067,981 + DVU0971 0.55 +1.0 1,068,005 + DVU0971 0.58 +0.0
Or see this region's nucleotide sequence