Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1805

Experiment: MoYLS4 with nitrite 0.125mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoYLS4 with nitrite 0.125mg/mL
1,867,482	+		DVU1804	0.57	+0.1
1,867,554	+		DVU1804	0.61	-0.2
1,867,665	-		DVU1804	0.67	-0.4
1,867,701	-		DVU1804	0.69	+0.1
1,867,706	-		DVU1804	0.69	-0.5
1,867,842	-		DVU1804	0.77	-2.0
1,867,881	+		DVU1804	0.79	-0.2
1,867,930	+		DVU1804	0.82	-0.3
1,868,071	+		DVU1804	0.90	-0.2
1,868,081	-				+0.6
1,868,081	-				-0.5
1,868,153	+				-0.8
1,868,200	+				-0.1
1,868,208	-				-0.3
1,868,240	-				+0.7
1,868,362	+				+0.1
1,868,445	+				-0.9
1,868,474	-				-0.1
1,868,657	-		DVU1805	0.14	-0.8
1,868,853	+		DVU1805	0.27	-0.4
1,868,901	-		DVU1805	0.30	+0.2
1,868,994	+		DVU1805	0.37	-0.1
1,869,001	-		DVU1805	0.37	+0.4
1,869,002	-		DVU1805	0.37	-0.2
1,869,045	-		DVU1805	0.40	+0.0
1,869,093	-		DVU1805	0.43	-1.4
1,869,120	+		DVU1805	0.45	+0.4
1,869,209	-		DVU1805	0.51	-0.2
1,869,209	-		DVU1805	0.51	+0.5
1,869,227	-		DVU1805	0.53	-0.0
1,869,256	+		DVU1805	0.55	+0.5
1,869,313	-		DVU1805	0.58	-1.7
1,869,366	+		DVU1805	0.62	+0.5
1,869,414	+		DVU1805	0.65	+0.2
1,869,526	-		DVU1805	0.73	-0.4
1,869,610	-		DVU1805	0.79	+0.1
1,869,641	+		DVU1805	0.81	-0.1
1,869,724	+		DVU1805	0.87	-0.0
1,869,732	-		DVU1805	0.87	-0.5
1,869,771	-		DVU1805	0.90	+0.2
1,869,815	+				+0.1
1,869,836	+				-0.0
1,869,842	-				-0.0
1,869,996	-				-0.2
1,870,038	+				-0.4
1,870,058	-				+0.4
1,870,157	-				-0.2
1,870,189	+				-0.1
1,870,262	+				-1.2
1,870,267	+				+1.2
1,870,346	+	mgtE	DVU1806	0.14	+0.3
1,870,375	-	mgtE	DVU1806	0.16	-0.2
1,870,375	-	mgtE	DVU1806	0.16	-1.1
1,870,377	+	mgtE	DVU1806	0.16	-2.0
1,870,402	-	mgtE	DVU1806	0.18	+0.0
1,870,461	+	mgtE	DVU1806	0.22	+0.3
1,870,520	-	mgtE	DVU1806	0.27	-1.4
1,870,722	-	mgtE	DVU1806	0.41	+0.2
1,870,723	-	mgtE	DVU1806	0.41	-0.1
1,870,861	-	mgtE	DVU1806	0.51	-0.8
1,870,861	-	mgtE	DVU1806	0.51	-0.2