Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1487

Experiment: MoYLS4 with nitrite 0.125mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoYLS4 with nitrite 0.125mg/mL
1,564,486	-		DVU1486	0.76	-0.2
1,564,536	-		DVU1486	0.78	-0.7
1,564,556	+		DVU1486	0.79	+0.2
1,564,574	+		DVU1486	0.79	-0.3
1,564,582	-		DVU1486	0.80	-0.2
1,564,623	-		DVU1486	0.81	-0.3
1,564,658	-		DVU1486	0.83	-0.5
1,564,686	+		DVU1486	0.84	+0.0
1,564,712	-		DVU1486	0.85	+0.9
1,564,836	-				+0.0
1,564,890	-				+0.3
1,564,898	+				+0.1
1,564,926	+				+0.2
1,564,932	+				-0.0
1,565,117	+				-0.9
1,565,125	-				+0.3
1,565,125	-				-0.1
1,565,189	-				-1.6
1,565,201	+				-2.0
1,565,258	+				-0.1
1,565,398	-				+1.3
1,565,426	-				+0.0
1,565,491	+				-1.6
1,565,503	+				+0.4
1,565,517	+		DVU1487	0.10	-1.1
1,565,542	-		DVU1487	0.16	-0.2
1,565,549	-		DVU1487	0.18	-1.0
1,565,722	+		DVU1487	0.58	-0.4
1,565,798	+		DVU1487	0.76	-1.5
1,565,808	+		DVU1487	0.78	-1.0
1,565,850	+		DVU1487	0.88	+0.2
1,565,880	-				-0.3
1,565,888	+				+0.2
1,565,888	+				-0.3
1,565,896	-				-1.1
1,566,030	-		DVU1488	0.15	+0.3
1,566,087	+		DVU1488	0.22	-1.3
1,566,095	-		DVU1488	0.23	-1.2
1,566,138	+		DVU1488	0.27	+0.2
1,566,146	-		DVU1488	0.28	+0.4
1,566,156	-		DVU1488	0.29	-0.1
1,566,157	+		DVU1488	0.29	+0.2
1,566,165	-		DVU1488	0.30	+0.1
1,566,169	+		DVU1488	0.31	-0.6
1,566,203	+		DVU1488	0.35	+0.4
1,566,274	+		DVU1488	0.42	+0.3
1,566,295	+		DVU1488	0.45	+0.2
1,566,340	-		DVU1488	0.50	+0.1
1,566,419	+		DVU1488	0.58	-0.0
1,566,519	-		DVU1488	0.69	+0.4
1,566,519	-		DVU1488	0.69	+0.2
1,566,597	+		DVU1488	0.78	+0.2
1,566,605	-		DVU1488	0.79	+0.2
1,566,796	+				+0.2
1,566,796	+				-0.1
1,566,797	+				+0.1
1,566,797	+				-1.8
1,566,797	+				-1.0
1,566,797	+				+0.4
1,566,804	-				-0.5
1,566,805	-				+0.1
1,566,805	-				-0.3
1,566,805	-				-0.1
1,566,805	-				-0.6
1,566,805	-				-1.5
1,566,831	-				+0.3
1,566,836	-		DVU1489	0.11	+0.1
1,566,836	-		DVU1489	0.11	+1.1