Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU3055

Experiment: MoYLS4 with nitrite 0.125mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoYLS4 with nitrite 0.125mg/mL
3,180,528	+		DVU3054	0.15	-0.7
3,180,543	+		DVU3054	0.16	+0.1
3,180,575	+		DVU3054	0.19	-0.1
3,180,608	-		DVU3054	0.22	-0.9
3,180,614	+		DVU3054	0.23	-2.8
3,180,663	+		DVU3054	0.27	-0.4
3,180,663	+		DVU3054	0.27	-0.7
3,180,671	-		DVU3054	0.28	-0.5
3,180,681	-		DVU3054	0.29	-0.4
3,180,688	+		DVU3054	0.29	-1.7
3,180,696	-		DVU3054	0.30	-1.2
3,180,711	-		DVU3054	0.32	-0.4
3,180,804	+		DVU3054	0.40	-0.0
3,180,829	-		DVU3054	0.42	+0.1
3,180,901	-		DVU3054	0.49	-0.1
3,180,917	+		DVU3054	0.50	-0.4
3,180,925	-		DVU3054	0.51	-0.9
3,181,002	-		DVU3054	0.58	+0.4
3,181,055	+		DVU3054	0.63	+0.2
3,181,075	+		DVU3054	0.65	-0.4
3,181,110	+		DVU3054	0.68	-0.2
3,181,324	+		DVU3054	0.88	+0.0
3,181,365	+				-0.0
3,181,395	+				-1.4
3,181,395	+				-0.7
3,181,403	-				-0.1
3,181,403	-				+0.2
3,181,431	-				-0.6
3,183,028	+				-0.3
3,183,028	-				-0.6
3,183,037	-				-0.4
3,183,050	+		DVU3056	0.11	-0.0
3,183,078	+		DVU3056	0.15	-1.3
3,183,121	+		DVU3056	0.22	-1.9
3,183,143	+		DVU3056	0.25	+0.3
3,183,144	+		DVU3056	0.26	-0.4
3,183,151	-		DVU3056	0.27	-1.8
3,183,334	-		DVU3056	0.55	+0.1
3,183,366	-		DVU3056	0.59	-0.3
3,183,438	-		DVU3056	0.70	-0.3
3,183,438	-		DVU3056	0.70	-0.6
3,183,457	-		DVU3056	0.73	-0.0
3,183,457	-		DVU3056	0.73	+0.0
3,183,680	+				-2.6
3,183,680	+				-0.2
3,183,685	+				+1.4
3,183,773	+				-0.1
3,183,783	+				-0.3
3,183,783	+				-1.4
3,183,835	+		DVU3057	0.11	-0.3
3,183,859	+		DVU3057	0.12	-0.5