Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2549

Experiment: MoYLS4 with nitrite 0.125mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoYLS4 with nitrite 0.125mg/mL
2,660,555	-		DVU2547	0.84	-2.2
2,660,583	-		DVU2547	0.88	-2.1
2,660,600	+				-2.0
2,660,608	-				-4.2
2,660,618	+				-2.6
2,660,628	+				-1.7
2,660,628	+				-2.1
2,660,629	+				-2.1
2,660,636	-				-2.1
2,660,643	-				-2.1
2,660,646	+				-2.3
2,660,646	+				-1.2
2,660,666	+				-1.9
2,660,674	-				-0.3
2,660,692	+				-0.8
2,660,705	+				-0.6
2,660,722	-				-0.5
2,660,756	-	acpD	DVU2548	0.14	+0.5
2,660,825	-	acpD	DVU2548	0.25	+0.2
2,660,917	+	acpD	DVU2548	0.40	-0.1
2,660,919	-	acpD	DVU2548	0.40	-0.5
2,660,938	+	acpD	DVU2548	0.43	-0.1
2,660,946	-	acpD	DVU2548	0.44	-0.4
2,661,015	-	acpD	DVU2548	0.55	-0.3
2,661,020	-	acpD	DVU2548	0.56	-1.1
2,661,084	+	acpD	DVU2548	0.66	+0.2
2,661,245	-				+0.1
2,661,411	+				+0.4
2,661,478	+				-0.4
2,661,484	-				-1.9
2,661,500	+				-0.8
2,661,500	+				+0.1
2,661,500	+				+0.3
2,661,506	-				-1.4
2,661,508	-				+0.0
2,661,535	+				+1.0
2,661,543	-				-1.1
2,661,543	-				-0.7
2,661,555	-				+0.0
2,661,627	-		DVU2549	0.27	-0.7
2,661,679	+		DVU2549	0.46	-0.8
2,661,703	-		DVU2549	0.55	+0.1
2,661,703	-		DVU2549	0.55	-0.9
2,661,787	+		DVU2549	0.85	-1.0
2,661,787	+		DVU2549	0.85	-0.3
2,661,787	+		DVU2549	0.85	-0.2
2,661,787	+		DVU2549	0.85	-0.4
2,661,792	+		DVU2549	0.87	-0.2
2,661,805	-				-1.8
2,661,815	-				-0.3
2,661,905	-				+0.1
2,661,914	+				-0.3
2,661,947	-				-1.1
2,661,978	+		DVU2550	0.27	-1.3
2,662,023	-		DVU2550	0.54	-0.1
2,662,040	-		DVU2550	0.64	+0.7
2,662,051	+		DVU2550	0.71	+0.1
2,662,051	+		DVU2550	0.71	-1.2
2,662,191	+				+0.0
2,662,199	-				+0.2
2,662,201	+				-0.1
2,662,285	+		DVU2551	0.17	+0.3
2,662,317	-		DVU2551	0.19	+0.2
2,662,329	+		DVU2551	0.20	+0.2
2,662,330	+		DVU2551	0.20	-1.2
2,662,463	+		DVU2551	0.31	-0.4
2,662,465	+		DVU2551	0.32	-0.5
2,662,480	+		DVU2551	0.33	-0.1
2,662,511	+		DVU2551	0.36	-1.4
2,662,612	+		DVU2551	0.44	+0.0
2,662,620	-		DVU2551	0.45	-0.2
2,662,622	-		DVU2551	0.45	+0.2
2,662,711	+		DVU2551	0.52	-0.2
2,662,730	-		DVU2551	0.54	-0.3
2,662,739	+		DVU2551	0.55	-0.2