Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2543

Experiment: MoYLS4 with nitrite 0.125mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoYLS4 with nitrite 0.125mg/mL
2,652,869	+		DVU2541	0.28	-0.9
2,652,900	-		DVU2541	0.32	-0.6
2,652,928	+		DVU2541	0.35	-0.4
2,652,936	-		DVU2541	0.36	+0.1
2,652,964	+		DVU2541	0.40	+0.7
2,652,977	+		DVU2541	0.41	-2.6
2,653,000	-		DVU2541	0.44	+0.0
2,653,010	+		DVU2541	0.45	+0.1
2,653,035	+		DVU2541	0.49	-0.0
2,653,043	+		DVU2541	0.50	-0.5
2,653,092	+		DVU2541	0.56	-2.8
2,653,102	+		DVU2541	0.57	-1.3
2,653,102	+		DVU2541	0.57	-0.2
2,653,102	+		DVU2541	0.57	+0.0
2,653,107	+		DVU2541	0.57	-0.4
2,653,126	+		DVU2541	0.60	-0.3
2,653,134	+		DVU2541	0.61	-0.1
2,653,203	+		DVU2541	0.69	-0.0
2,653,270	+		DVU2541	0.78	+0.0
2,653,320	-		DVU2541	0.84	-0.2
2,653,376	+				-0.7
2,653,377	-				+0.2
2,653,384	-				+0.5
2,653,388	+				-0.0
2,653,453	+				+0.2
2,653,470	+				-0.6
2,653,478	-				-0.2
2,653,478	-				-1.7
2,653,559	+				+0.0
2,653,559	+				-2.3
2,653,567	-				-0.1
2,653,650	+				-0.3
2,653,658	-				-0.2
2,653,658	-				+0.2
2,653,669	+				+0.1
2,653,677	-				-1.1
2,653,732	+				+0.2
2,653,732	+				-0.8
2,653,777	+				+0.5
2,653,777	+				+0.7
2,653,787	-				+0.2
2,653,787	-				+0.3
2,653,787	-				+0.4
2,653,844	+				+0.6
2,653,859	+				+1.2
2,653,909	-				+1.1
2,653,924	+				+0.7
2,653,929	+				+0.7
2,653,937	-				+0.5
2,653,937	-				+0.4
2,653,937	-				+0.8
2,653,937	-				+0.7
2,653,977	-				-0.5
2,654,022	+				+0.8
2,654,046	-	b0873	DVU2543	0.11	-0.4
2,654,047	+	b0873	DVU2543	0.11	-0.5
2,654,077	-	b0873	DVU2543	0.13	+0.3
2,654,079	-	b0873	DVU2543	0.13	+0.0
2,654,098	-	b0873	DVU2543	0.14	-0.1
2,654,113	-	b0873	DVU2543	0.15	+1.0
2,654,211	-	b0873	DVU2543	0.20	+0.7
2,654,228	-	b0873	DVU2543	0.21	+0.4
2,654,246	+	b0873	DVU2543	0.22	+0.3
2,654,313	+	b0873	DVU2543	0.26	-0.8
2,654,449	+	b0873	DVU2543	0.34	+1.6
2,654,558	+	b0873	DVU2543	0.41	+0.7
2,654,566	-	b0873	DVU2543	0.41	-0.2
2,654,631	+	b0873	DVU2543	0.45	+0.1
2,654,631	+	b0873	DVU2543	0.45	+0.8
2,654,639	-	b0873	DVU2543	0.46	+0.7
2,654,639	-	b0873	DVU2543	0.46	-1.0
2,654,703	+	b0873	DVU2543	0.49	+0.3
2,654,759	-	b0873	DVU2543	0.53	+0.6
2,654,904	+	b0873	DVU2543	0.61	+1.5
2,654,935	-	b0873	DVU2543	0.63	+1.4
2,654,958	-	b0873	DVU2543	0.64	+0.8
2,655,015	+	b0873	DVU2543	0.68	+0.5
2,655,050	-	b0873	DVU2543	0.70	+1.3
2,655,059	+	b0873	DVU2543	0.70	+1.4
2,655,085	+	b0873	DVU2543	0.72	+0.8
2,655,108	+	b0873	DVU2543	0.73	+0.7
2,655,110	+	b0873	DVU2543	0.73	+0.8
2,655,207	+	b0873	DVU2543	0.79	+0.5
2,655,275	+	b0873	DVU2543	0.83	+0.5
2,655,283	-	b0873	DVU2543	0.83	+0.0
2,655,283	-	b0873	DVU2543	0.83	+0.6
2,655,328	+	b0873	DVU2543	0.86	+0.4
2,655,388	+	b0873	DVU2543	0.90	+1.0
2,655,397	+				+0.7
2,655,504	-				-0.7
2,655,543	+				+0.5
2,655,553	+				+0.9
2,655,558	+				+1.0
2,655,566	-				+0.8
2,655,622	+				-1.7
2,655,628	-				+0.0
2,655,680	-				-0.5
2,655,707	+		DVU2544	0.10	-0.7
2,655,739	-		DVU2544	0.14	-0.8
2,655,762	+		DVU2544	0.17	-0.1
2,655,762	+		DVU2544	0.17	-1.6
2,655,762	+		DVU2544	0.17	-0.8
2,655,762	+		DVU2544	0.17	-2.2
2,655,797	+		DVU2544	0.21	-0.7
2,655,851	+		DVU2544	0.28	-0.1
2,655,853	-		DVU2544	0.28	-0.6
2,655,876	+		DVU2544	0.31	-1.2
2,655,876	-		DVU2544	0.31	-0.8
2,655,924	+		DVU2544	0.37	-0.2
2,655,932	-		DVU2544	0.38	-0.4
2,655,937	-		DVU2544	0.38	-2.9
2,655,950	+		DVU2544	0.40	-0.3
2,655,992	+		DVU2544	0.45	-0.2
2,656,064	-		DVU2544	0.54	-0.5
2,656,108	+		DVU2544	0.59	-0.9
2,656,171	-		DVU2544	0.67	-1.8
2,656,198	+		DVU2544	0.70	-0.5
2,656,309	-		DVU2544	0.84	-0.7
2,656,393	-				-0.5
2,656,431	-				-1.7
2,656,432	+				-0.1
2,656,451	+				+0.0
2,656,497	-				-1.7
2,656,518	+				-2.3
2,656,535	+				-0.5
2,656,535	+				-0.1