Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1122

Experiment: MoYLS4 with nitrite 0.125mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoYLS4 with nitrite 0.125mg/mL
1,225,686	-				-0.8
1,225,700	-				-0.0
1,225,712	+				+0.0
1,225,748	+				+0.5
1,225,778	+				-0.6
1,225,799	+				-0.1
1,225,799	+				-0.2
1,225,803	-				-0.2
1,225,881	-				-1.5
1,226,054	+		DVU1121	0.22	+0.4
1,226,062	-		DVU1121	0.23	-0.1
1,226,112	+		DVU1121	0.31	+0.1
1,226,148	-		DVU1121	0.37	+0.2
1,226,220	+		DVU1121	0.49	+0.3
1,226,228	-		DVU1121	0.50	-0.1
1,226,229	+		DVU1121	0.50	+0.1
1,226,256	-		DVU1121	0.55	-0.8
1,226,288	-		DVU1121	0.60	+0.5
1,226,369	-		DVU1121	0.73	-0.7
1,226,479	+				+0.9
1,226,679	+				+0.1
1,226,720	-				-1.1
1,226,722	+				+0.1
1,226,755	+		DVU1122	0.11	+0.1
1,226,791	+		DVU1122	0.13	+0.0
1,226,796	+		DVU1122	0.13	-0.6
1,226,824	-		DVU1122	0.15	+0.0
1,226,997	+		DVU1122	0.27	+0.8
1,227,022	+		DVU1122	0.29	-1.6
1,227,043	-		DVU1122	0.30	+0.2
1,227,052	+		DVU1122	0.31	-0.6
1,227,076	+		DVU1122	0.32	+0.2
1,227,156	+		DVU1122	0.38	-0.4
1,227,169	-		DVU1122	0.39	-0.1
1,227,169	-		DVU1122	0.39	+0.3
1,227,186	+		DVU1122	0.40	-0.3
1,227,299	-		DVU1122	0.47	+0.0
1,227,363	+		DVU1122	0.52	+0.1
1,227,363	-		DVU1122	0.52	+0.0
1,227,446	+		DVU1122	0.57	-0.3
1,227,471	+		DVU1122	0.59	+2.3
1,227,479	-		DVU1122	0.59	+0.5
1,227,496	-		DVU1122	0.61	-1.5
1,227,500	+		DVU1122	0.61	+0.6
1,227,522	+		DVU1122	0.62	+1.2
1,227,613	-		DVU1122	0.68	-0.4
1,227,628	+		DVU1122	0.69	+0.2
1,227,636	-		DVU1122	0.70	-0.1
1,227,652	-		DVU1122	0.71	-1.4
1,227,695	+		DVU1122	0.74	-0.0
1,227,742	-		DVU1122	0.77	+0.3
1,227,768	+		DVU1122	0.79	-0.1
1,227,768	+		DVU1122	0.79	+0.0
1,227,768	+		DVU1122	0.79	+0.6
1,227,776	-		DVU1122	0.79	-1.1
1,227,874	-		DVU1122	0.86	-0.1
1,227,885	+		DVU1122	0.87	-0.0
1,227,888	-		DVU1122	0.87	+0.4
1,227,893	-		DVU1122	0.87	-0.6
1,227,918	-		DVU1122	0.89	+1.6
1,227,938	+				-0.4
1,227,970	-				-0.6
1,228,014	-				+1.4
1,228,060	-				+0.0
1,228,076	+				+0.3
1,228,120	-				-0.4
1,228,142	-				+1.0
1,228,160	+				-1.0
1,228,167	-				+0.1
1,228,277	-		DVU1123	0.25	-1.1
1,228,285	-		DVU1123	0.27	-0.2
1,228,348	+		DVU1123	0.38	-0.1
1,228,416	-		DVU1123	0.50	+0.9
1,228,427	+		DVU1123	0.52	+0.2
1,228,437	+		DVU1123	0.54	-0.3
1,228,445	-		DVU1123	0.55	-0.2
1,228,503	-		DVU1123	0.65	-0.1
1,228,567	-		DVU1123	0.76	-0.2
1,228,617	+		DVU1123	0.85	+0.2
1,228,617	+		DVU1123	0.85	+0.1
1,228,617	+		DVU1123	0.85	-1.2
1,228,639	+		DVU1123	0.89	+0.1
1,228,640	-		DVU1123	0.89	-1.0
1,228,678	+				-0.2
1,228,678	+				-0.4
1,228,745	-				-0.6
1,228,772	+		DVU1124	0.13	+0.3
1,228,793	-		DVU1124	0.22	+0.2
1,228,822	-		DVU1124	0.34	-0.9
1,228,846	-		DVU1124	0.44	-0.9
1,228,859	+		DVU1124	0.49	+0.0
1,228,883	+		DVU1124	0.59	-0.1
1,228,896	+		DVU1124	0.64	-0.5
1,228,918	+		DVU1124	0.73	-0.5
1,228,918	+		DVU1124	0.73	+0.0
1,228,943	+		DVU1124	0.84	+0.1
1,228,955	+		DVU1124	0.88	-0.6
1,228,955	+		DVU1124	0.88	-1.0
1,228,955	+		DVU1124	0.88	-0.6
1,228,955	+		DVU1124	0.88	-1.2
1,228,955	+		DVU1124	0.88	-0.1
1,228,962	+				+0.2
1,228,963	-				-0.2
1,228,963	-				+0.1
1,228,963	-				-2.1
1,228,963	-				-0.7
1,228,963	-				-0.7
1,229,046	-		DVU1125	0.14	-1.5