Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU0999

Experiment: MoYLS4 with nitrite 0.125mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoYLS4 with nitrite 0.125mg/mL
1,093,520	-				-0.1
1,093,535	+				-2.3
1,093,548	+				-1.0
1,093,892	+				-2.4
1,093,900	-				-3.7
1,093,938	+				-1.1
1,093,946	-				-0.9
1,094,000	+				-0.5
1,094,074	-		DVU0999	0.13	-1.7
1,094,089	+		DVU0999	0.14	-1.6
1,094,097	-		DVU0999	0.14	-1.4
1,094,098	-		DVU0999	0.14	-2.5
1,094,099	+		DVU0999	0.14	-2.1
1,094,152	-		DVU0999	0.17	-1.2
1,094,260	-		DVU0999	0.22	-1.1
1,094,265	+		DVU0999	0.22	-1.6
1,094,296	+		DVU0999	0.23	-0.9
1,094,331	-		DVU0999	0.25	-2.4
1,094,331	-		DVU0999	0.25	-1.0
1,094,382	-		DVU0999	0.27	-1.5
1,094,382	-		DVU0999	0.27	-1.6
1,094,507	-		DVU0999	0.33	-0.8
1,094,592	+		DVU0999	0.37	-1.0
1,094,656	-		DVU0999	0.40	-0.8
1,094,670	+		DVU0999	0.41	-0.5
1,094,712	+		DVU0999	0.43	-0.9
1,094,729	+		DVU0999	0.44	-0.8
1,094,746	-		DVU0999	0.44	-0.8
1,094,748	+		DVU0999	0.44	-1.6
1,094,756	-		DVU0999	0.45	-0.1
1,094,800	-		DVU0999	0.47	-0.6
1,094,830	-		DVU0999	0.48	-1.7
1,094,871	-		DVU0999	0.50	-0.5
1,094,897	+		DVU0999	0.51	-0.7
1,095,126	+		DVU0999	0.62	-0.2
1,095,147	+		DVU0999	0.63	-0.0
1,095,154	+		DVU0999	0.63	-1.1
1,095,184	+		DVU0999	0.65	-0.6
1,095,184	+		DVU0999	0.65	-0.8
1,095,184	+		DVU0999	0.65	-0.6
1,095,192	-		DVU0999	0.65	-0.3
1,095,212	+		DVU0999	0.66	-0.7
1,095,256	+		DVU0999	0.68	-0.7
1,095,264	-		DVU0999	0.68	-1.6
1,095,319	+		DVU0999	0.71	-1.8
1,095,378	-		DVU0999	0.74	-0.0
1,095,381	-		DVU0999	0.74	-2.4
1,095,405	+		DVU0999	0.75	-2.2
1,095,406	+		DVU0999	0.75	-0.7
1,095,425	+		DVU0999	0.76	-1.3
1,095,461	-		DVU0999	0.77	-3.0
1,095,495	+		DVU0999	0.79	-0.9
1,095,688	+		DVU0999	0.88	-0.6
1,095,775	+				-0.9
1,095,898	-				-0.4
1,095,909	-				-0.5
1,095,927	+				-0.9
1,095,935	-				-0.2
1,095,936	-				+0.5
1,095,963	+				-0.7
1,095,976	-				-0.5
1,096,020	-				-0.3
1,096,030	+				-0.5
1,096,052	+				+0.3
1,096,083	-				-0.4
1,096,224	+		DVU1000	0.13	-0.4
1,096,224	+		DVU1000	0.13	+0.3
1,096,232	-		DVU1000	0.14	+0.0
1,096,334	+		DVU1000	0.22	+0.3
1,096,377	+		DVU1000	0.26	+0.2
1,096,406	-		DVU1000	0.28	-1.3
1,096,452	-		DVU1000	0.32	-0.2
1,096,476	-		DVU1000	0.34	-0.4
1,096,497	+		DVU1000	0.36	+0.0
1,096,537	+		DVU1000	0.39	+0.1
1,096,540	-		DVU1000	0.39	-2.4
1,096,591	+		DVU1000	0.43	-0.3
1,096,717	+		DVU1000	0.54	-0.4
1,096,737	+		DVU1000	0.55	-1.4
1,096,737	+		DVU1000	0.55	-0.2
1,096,745	-		DVU1000	0.56	-0.1
1,096,808	+		DVU1000	0.61	-0.1
1,096,944	-		DVU1000	0.72	-0.3