Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3762c

Experiment: 7H9 with Streptomycin 0.178 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Streptomycin 0.178 ug/mL
4,206,049	-		Rv3761c	0.18	-0.3
4,206,073	+		Rv3761c	0.20	+0.9
4,206,074	-		Rv3761c	0.20	+0.2
4,206,141	+		Rv3761c	0.26	-0.1
4,206,142	-		Rv3761c	0.27	-1.8
4,206,142	-		Rv3761c	0.27	+0.5
4,206,165	+		Rv3761c	0.29	-0.1
4,206,166	-		Rv3761c	0.29	-0.7
4,206,483	-		Rv3761c	0.59	-0.1
4,206,778	+		Rv3761c	0.87	-0.3
4,206,929	-				+0.9
4,206,953	-				-0.2
4,207,101	-				+0.6
4,207,191	+		Rv3762c	0.10	-0.3
4,207,192	-		Rv3762c	0.10	-0.2
4,207,192	-		Rv3762c	0.10	+0.9
4,207,613	-		Rv3762c	0.33	-0.3
4,207,681	+		Rv3762c	0.36	+0.2
4,207,681	+		Rv3762c	0.36	-0.0
4,207,681	+		Rv3762c	0.36	-0.6
4,207,682	-		Rv3762c	0.36	-0.3
4,207,798	+		Rv3762c	0.43	-1.4
4,207,838	-		Rv3762c	0.45	+0.1
4,207,838	-		Rv3762c	0.45	+0.9
4,207,838	-		Rv3762c	0.45	-0.3
4,207,843	+		Rv3762c	0.45	-0.1
4,207,843	+		Rv3762c	0.45	-0.9
4,207,843	+		Rv3762c	0.45	-0.8
4,207,844	-		Rv3762c	0.45	-1.3
4,207,844	-		Rv3762c	0.45	-0.7
4,208,027	+		Rv3762c	0.55	-0.3
4,208,075	-		Rv3762c	0.57	-0.3
4,208,269	+		Rv3762c	0.68	-0.1
4,208,270	-		Rv3762c	0.68	-1.1
4,208,270	-		Rv3762c	0.68	+0.0
4,208,270	-		Rv3762c	0.68	-0.3
4,208,270	-		Rv3762c	0.68	-0.3
4,208,270	-		Rv3762c	0.68	-0.0
4,208,270	-		Rv3762c	0.68	-0.7
4,208,276	-		Rv3762c	0.68	-0.9
4,208,438	-		Rv3762c	0.77	-1.6
4,208,482	+		Rv3762c	0.79	-0.1
4,208,483	-		Rv3762c	0.79	-1.9
4,208,702	-				+0.6
4,208,888	+				+0.8
4,208,888	+				-1.2
4,208,889	-				-0.5
4,208,892	-				-1.1
4,208,906	+				+0.6
4,208,907	-				-0.2
4,208,963	+				-0.4
4,208,981	-				-0.5
4,208,989	+				+0.3
4,208,989	+				-0.3
4,208,989	+				+0.1
4,209,381	-		Rv3763	0.70	-0.1
4,209,529	+				+0.3
4,209,529	+				-0.7
4,209,530	-				-0.1