Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3335c

Experiment: 7H9 with Streptomycin 0.178 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Streptomycin 0.178 ug/mL
3,720,803	-				+0.8
3,720,845	+				-0.9
3,720,845	+				-0.1
3,720,845	+				-0.4
3,721,054	+				-0.9
3,721,055	-				-0.1
3,721,121	+				-0.0
3,721,122	-				+0.7
3,721,210	+				-0.3
3,721,211	-				+0.2
3,721,211	-				+0.4
3,721,315	-		Rv3334	0.13	+0.2
3,721,371	+		Rv3334	0.26	+0.4
3,721,404	-		Rv3334	0.33	-0.3
3,721,597	-		Rv3334	0.77	+0.1
3,721,851	+		Rv3335c	0.14	-0.9
3,721,862	-		Rv3335c	0.15	-0.5
3,722,154	+		Rv3335c	0.49	-0.5
3,722,471	-		Rv3335c	0.85	-1.6
3,722,622	+				-1.5