Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3332

Experiment: 7H9 with Streptomycin 0.178 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Streptomycin 0.178 ug/mL
3,717,681	+		Rv3331	0.39	+0.2
3,718,008	+		Rv3331	0.61	-0.1
3,718,008	+		Rv3331	0.61	-0.1
3,718,009	-		Rv3331	0.61	+1.3
3,718,308	+		Rv3331	0.81	+0.9
3,718,759	+		Rv3332	0.14	-0.8
3,718,855	+		Rv3332	0.23	-0.4
3,719,991	+				-0.2
3,720,439	+		Rv3333c	0.59	+0.2
3,720,440	-		Rv3333c	0.59	-0.2
3,720,440	-		Rv3333c	0.59	+0.2
3,720,516	+		Rv3333c	0.68	+0.5
3,720,517	-		Rv3333c	0.69	-0.3
3,720,517	-		Rv3333c	0.69	-0.7
3,720,517	-		Rv3333c	0.69	+0.4
3,720,523	+		Rv3333c	0.69	-0.5