Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3089

Experiment: 7H9 with Streptomycin 0.178 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Streptomycin 0.178 ug/mL
3,455,528	+		Rv3088	0.83	-0.1
3,455,975	-		Rv3089	0.14	-1.6
3,456,009	+		Rv3089	0.16	-1.3
3,456,009	+		Rv3089	0.16	-1.5
3,456,248	-		Rv3089	0.32	-0.3
3,456,628	+		Rv3089	0.57	+0.0
3,457,162	+				-0.7
3,457,163	-				-0.1
3,457,163	-				-0.3
3,457,508	-				-0.8
3,458,127	-				-0.5
3,458,239	+				+0.2