Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1538c

Experiment: 7H9 with Streptomycin 0.178 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Streptomycin 0.178 ug/mL
1,740,494	-		Rv1537	0.46	+1.6
1,740,716	-		Rv1537	0.62	-0.1
1,740,739	+		Rv1537	0.63	-2.6
1,740,936	+		Rv1537	0.78	-0.1
1,741,174	-				-1.6
1,741,270	-				-0.4
1,741,348	+		Rv1538c	0.14	+0.5
1,741,610	-		Rv1538c	0.41	+0.6
1,741,867	+		Rv1538c	0.67	-0.7
1,741,868	-		Rv1538c	0.67	-0.8
1,741,868	-		Rv1538c	0.67	+0.6
1,741,904	+		Rv1538c	0.71	-1.1
1,741,972	-		Rv1538c	0.77	+0.5
1,742,028	+		Rv1538c	0.83	+0.7
1,742,029	-		Rv1538c	0.83	+1.9
1,742,029	-		Rv1538c	0.83	+2.5
1,742,091	+		Rv1538c	0.90	+0.8
1,742,136	-				+0.6
1,742,797	+				-1.4
1,742,797	+				-0.4
1,742,797	+				-0.1
1,742,827	+				-0.4
1,742,827	+				-1.1
1,742,827	+				-0.3
1,742,827	+				+0.1
1,742,827	+				-0.3