Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1473A

Experiment: 7H9 with Streptomycin 0.178 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Streptomycin 0.178 ug/mL
1,661,841	+		Rv1473	0.73	+0.1
1,662,288	-				-0.4
1,662,288	-				-0.1
1,662,347	+				+0.9
1,662,347	+				+0.0
1,662,348	-				+0.0
1,662,348	-				-0.0
1,662,353	-				+0.9
1,662,353	-				+2.4
1,662,486	+		Rv1473A	0.55	+0.2
1,662,494	+		Rv1473A	0.59	+3.5
1,662,987	-		Rv1474c	0.61	-0.1
1,662,987	-		Rv1474c	0.61	-0.3
1,662,987	-		Rv1474c	0.61	+0.5
1,663,229	+				-0.3
1,663,231	-				+0.2