Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1068c

Experiment: 7H9 with Streptomycin 0.178 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Streptomycin 0.178 ug/mL
1,190,165	+		Rv1067c	0.87	+0.0
1,190,166	-		Rv1067c	0.87	-0.1
1,190,240	+				+1.5
1,190,241	-				-0.2
1,190,241	-				+0.8
1,190,694	-				+0.6
1,190,704	-				-0.3
1,190,725	+				+0.4
1,190,726	-				-0.3
1,190,759	-				+0.0
1,191,243	-		Rv1068c	0.35	+0.6
1,191,889	+		Rv1068c	0.81	-0.3
1,191,964	+		Rv1068c	0.87	+1.5
1,192,141	+				-0.6
1,192,142	-				+0.2
1,192,142	-				+0.3
1,192,274	-				+0.2
1,192,411	+				-0.7
1,192,628	+				-0.3
1,192,672	-				-0.8
1,192,820	+		Rv1069c	0.18	-0.4
1,192,821	-		Rv1069c	0.18	+0.2
1,192,907	+		Rv1069c	0.23	-0.5