Experiment: 7H9 with Streptomycin 0.178 ug/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0761c and Rv0762c are separated by 98 nucleotides Rv0762c and Rv0763c are separated by 2 nucleotides Rv0763c and Rv0764c are separated by 2 nucleotides Rv0764c and Rv0765c overlap by 1 nucleotides Rv0765c and Rv0766c overlap by 1 nucleotides
Rv0761c: Rv0761c - Possible zinc-containing alcohol dehydrogenase NAD dependent AdhB, at 854,699 to 855,826
Rv0761c
Rv0762c: Rv0762c - Conserved hypothetical protein, at 855,925 to 856,470
Rv0762c
Rv0763c: Rv0763c - Possible ferredoxin, at 856,473 to 856,679
Rv0763c
Rv0764c: Rv0764c - Cytochrome P450 51 Cyp51 (CYPL1) (P450-L1A1) (sterol 14-alpha demethylase) (lanosterol 14-alpha demethylase) (P450-14DM), at 856,682 to 858,037
Rv0764c
Rv0765c: Rv0765c - Probable oxidoreductase, at 858,037 to 858,864
Rv0765c
Rv0766c: Rv0766c - Probable cytochrome P450 123 Cyp123, at 858,864 to 860,072
Rv0766c
Position (kb) 856
857
858
859 Strain fitness (log2 ratio) -1
0
1
2 at 855.917 kb on + strand at 855.959 kb on + strand at 855.960 kb on - strand at 855.963 kb on - strand at 856.021 kb on + strand, within Rv0762c at 856.142 kb on + strand, within Rv0762c at 856.235 kb on + strand, within Rv0762c at 856.347 kb on - strand, within Rv0762c at 856.347 kb on - strand, within Rv0762c at 856.347 kb on - strand, within Rv0762c at 856.762 kb on - strand at 857.485 kb on - strand, within Rv0764c at 857.497 kb on - strand, within Rv0764c at 857.601 kb on + strand, within Rv0764c at 857.602 kb on - strand, within Rv0764c at 858.390 kb on - strand, within Rv0765c at 858.514 kb on + strand, within Rv0765c at 858.865 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 7H9 with Streptomycin 0.178 ug/mL remove 855,917 + -0.0 855,959 + -0.1 855,960 - +1.0 855,963 - +0.6 856,021 + Rv0762c 0.18 +0.6 856,142 + Rv0762c 0.40 -0.7 856,235 + Rv0762c 0.57 -0.2 856,347 - Rv0762c 0.77 -0.1 856,347 - Rv0762c 0.77 +0.1 856,347 - Rv0762c 0.77 +1.9 856,762 - +0.9 857,485 - Rv0764c 0.59 +0.8 857,497 - Rv0764c 0.60 +0.2 857,601 + Rv0764c 0.68 +0.0 857,602 - Rv0764c 0.68 +1.8 858,390 - Rv0765c 0.43 +0.4 858,514 + Rv0765c 0.58 -0.9 858,865 + -0.7
Or see this region's nucleotide sequence