Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3428c

Experiment: 7H9 with Streptomycin 0.178 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Streptomycin 0.178 ug/mL
3,843,804	+				-0.1
3,843,805	-				+0.3
3,843,805	-				-0.7
3,843,829	+				-1.2
3,843,830	-				-0.6
3,843,856	+				-0.7
3,843,863	+				-0.2
3,843,886	+				+0.3
3,843,887	-				-0.9
3,844,455	+		Rv3427c	0.75	-0.3
3,844,602	-				-1.2
3,844,606	-				+0.3
3,844,635	-				+1.1
3,845,360	-		Rv3428c	0.50	+0.1
3,845,491	-		Rv3428c	0.61	+0.9
3,845,959	+				+0.9
3,846,149	-				+0.0
3,846,256	+				-0.5
3,846,362	+				+0.4
3,846,363	-				-0.5
3,846,387	-				+0.7
3,846,534	+				-0.4
3,846,534	+				+0.2
3,846,535	-				-0.5
3,846,535	-				+0.7
3,846,585	-				-0.7
3,846,762	-				+0.9
3,846,762	-				+1.0