Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3013

Experiment: 7H9 with Streptomycin 0.178 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Streptomycin 0.178 ug/mL
3,371,743	+				+1.0
3,371,789	+				-0.4
3,371,790	-				+0.3
3,371,790	-				+0.3
3,371,824	+				+0.6
3,371,824	+				+0.2
3,371,824	+				-0.0
3,371,824	+				+0.4
3,371,825	-				+0.3
3,371,825	-				-0.2
3,371,828	+				-0.3
3,371,829	-				-0.7
3,372,336	+		Rv3013	0.79	-1.2
3,372,437	-				-1.4
3,372,437	-				+1.3
3,372,441	-				+1.0
3,372,505	-				-0.8
3,372,546	+				-0.6