Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2744c

Experiment: 7H9 with Streptomycin 0.178 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Streptomycin 0.178 ug/mL
3,056,266	-				+0.3
3,056,290	+				+0.3
3,056,291	-				+0.6
3,056,291	-				+0.4
3,056,382	+				+0.3
3,056,383	-				+0.5
3,056,383	-				+0.6
3,056,385	-				+1.0
3,056,385	-				+1.4
3,056,643	+		Rv2743c	0.27	+0.4
3,056,643	+		Rv2743c	0.27	+0.3
3,056,644	-		Rv2743c	0.28	+0.9
3,056,745	-		Rv2743c	0.40	+0.7
3,056,942	+		Rv2743c	0.64	-1.3
3,056,942	+		Rv2743c	0.64	-0.1
3,056,942	+		Rv2743c	0.64	+0.5
3,056,943	-		Rv2743c	0.64	+0.0
3,056,943	-		Rv2743c	0.64	+0.7
3,057,065	+		Rv2743c	0.79	+0.8
3,057,252	+				+0.0
3,057,252	+				+0.6
3,057,252	+				+0.5
3,057,253	-				-0.3
3,057,253	-				+1.2
3,057,278	-				+0.5
3,057,771	+		Rv2744c	0.64	+1.0
3,057,771	+		Rv2744c	0.64	+0.2
3,057,772	-		Rv2744c	0.64	+0.6
3,058,032	+				+0.0
3,058,032	+				+2.5
3,058,033	-				+2.6
3,058,033	-				+0.3
3,058,046	-				+0.7
3,058,194	+				+0.6
3,058,195	-				+0.3
3,058,361	-		Rv2745c	0.50	+1.0
3,058,422	+		Rv2745c	0.68	+0.7
3,058,422	+		Rv2745c	0.68	+0.3