Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2197c

Experiment: 7H9 with Streptomycin 0.178 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Streptomycin 0.178 ug/mL
2,461,326	-				-0.9
2,461,547	+				+1.1
2,461,549	+				+0.1
2,461,549	+				+0.1
2,461,550	-				-0.1
2,461,599	-		Rv2197c	0.15	+0.5
2,461,599	-		Rv2197c	0.15	+0.2
2,461,641	-		Rv2197c	0.21	+0.2
2,461,641	-		Rv2197c	0.21	+3.4
2,461,641	-		Rv2197c	0.21	-2.1
2,461,641	-		Rv2197c	0.21	-0.4
2,461,943	-		Rv2197c	0.68	+1.5
2,461,949	+		Rv2197c	0.69	+2.3
2,462,107	+				-0.0
2,462,108	-				-0.0
2,462,136	-				-0.4
2,462,728	-		Rv2198c	0.64	+0.1
2,463,056	-				+0.8