Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2004c

Experiment: 7H9 with Streptomycin 0.178 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Streptomycin 0.178 ug/mL
2,248,565	-				-0.0
2,248,593	-				-0.5
2,248,771	+		Rv2003c	0.24	+0.2
2,248,823	-		Rv2003c	0.30	+0.3
2,249,326	-		Rv2003c	0.89	-0.4
2,249,504	-				+0.6
2,249,880	+		Rv2004c	0.27	-1.8
2,250,140	-		Rv2004c	0.44	+1.1
2,250,768	-		Rv2004c	0.86	+0.2
2,251,578	-		Rv2005c	0.66	-0.8
2,251,578	-		Rv2005c	0.66	-0.1
2,251,578	-		Rv2005c	0.66	+0.0
2,251,581	+		Rv2005c	0.66	-0.0
2,251,597	-		Rv2005c	0.68	-0.1
2,251,741	-		Rv2005c	0.84	-1.3
2,251,741	-		Rv2005c	0.84	-0.1
2,251,842	+				-0.5
2,251,877	+				-1.7
2,251,913	-				-0.6
2,251,913	-				+0.2
2,251,913	-				+0.3