Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1638A

Experiment: 7H9 with Streptomycin 0.178 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Streptomycin 0.178 ug/mL
1,845,890	-		Rv1638	0.74	+0.7
1,846,058	-		Rv1638	0.79	-0.8
1,846,117	+		Rv1638	0.81	-1.0
1,846,118	-		Rv1638	0.81	-0.1
1,846,118	-		Rv1638	0.81	-0.9
1,846,204	+		Rv1638	0.84	-0.8
1,846,205	-		Rv1638	0.84	-0.1
1,846,208	+		Rv1638	0.85	-0.6
1,846,209	-		Rv1638	0.85	-1.8
1,846,209	-		Rv1638	0.85	+2.5
1,846,209	-		Rv1638	0.85	-0.6
1,846,209	-		Rv1638	0.85	-0.4
1,846,209	-		Rv1638	0.85	-0.6
1,846,237	+		Rv1638	0.86	-1.2
1,846,340	-		Rv1638	0.89	-1.6
1,846,382	+				-0.6
1,846,382	+				-0.5
1,846,382	+				-0.3
1,846,428	+				-1.2
1,846,449	+				+1.0
1,846,990	+				-1.9
1,847,324	-		Rv1639c	0.23	-0.8
1,847,324	-		Rv1639c	0.23	-0.2
1,847,462	+		Rv1639c	0.32	+2.0
1,847,576	-		Rv1639c	0.40	+0.1
1,847,674	-		Rv1639c	0.47	+0.0
1,847,858	-		Rv1639c	0.59	-0.2